{"paper":{"title":"Latent Space-Driven Quantification of Biofilm Formation using Time Resolved Droplet Microfluidics","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":[],"primary_cat":"physics.bio-ph","authors_text":"Aur\\'elie Vigne, Caroline Beck Adiels, Daniela P\\'erez Guerrero, Daniel Midtvedt, Giovanni Volpe, Jes\\'us Manuel Ant\\'unez Dom\\'inguez, Lisa D. Muiznieks, Wylie Ahmed","submitted_at":"2025-07-10T11:00:08Z","abstract_excerpt":"Bacterial biofilms play a significant role in various fields that impact our daily lives, from detrimental public health hazards to beneficial applications in bioremediation, biodegradation, and wastewater treatment. However, high-resolution tools for studying their dynamic responses to environmental changes and collective cellular behavior remain scarce. To characterize and quantify biofilm development, we present a droplet-based microfluidic platform combined with an image analysis tool for in-situ studies. In this setup, Bacillus subtilis was inoculated in liquid Lysogeny Broth microdroplet"},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"2507.07632","kind":"arxiv","version":1},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"integrity":{"clean":true,"summary":{"advisory":0,"critical":0,"by_detector":{},"informational":0},"endpoint":"/pith/2507.07632/integrity.json","findings":[],"available":true,"detectors_run":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938"},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"}