BioBLP is a modular embedding framework for multimodal biomedical KGs supporting heterogeneous attributes and missing data, with a pretraining strategy that improves results on drug-protein interaction prediction especially for low-degree entities.
MKGE: Knowledge graph embedding with molecular structure information
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BioBLP: A Modular Framework for Learning on Multimodal Biomedical Knowledge Graphs
BioBLP is a modular embedding framework for multimodal biomedical KGs supporting heterogeneous attributes and missing data, with a pretraining strategy that improves results on drug-protein interaction prediction especially for low-degree entities.