{"as_of":"2026-08-09T08:11:00Z","caps":{"database_statements":6,"inbound":100,"outbound":100},"context_digest":"sha256:0ed9412ea85fde72cda02db17af08d5502f43b304aa5fcd15b8844c0cc53a215","coverage":[{"denominator":35,"lane":"reference_resolution","note":"Typed states for the displayed outbound observations.","records_observed":35,"source":"paper_references, paper_reference_links","source_observed_at":"2026-08-06T18:48:08.798700Z","state":"measured"},{"denominator":35,"lane":"standing_notices","note":"One-hop event checks from named stored sources.","records_observed":35,"source":"scholarly_work_events, retraction_status_cache","source_observed_at":"2026-08-09T06:31:02.800959+00:00","state":"measured"},{"denominator":0,"lane":"inbound_itemization","note":"Pith citing papers itemized under the disclosed page cap.","records_observed":0,"source":"paper_references, paper_reference_links","source_observed_at":null,"state":"measured"},{"denominator":1,"lane":"external_citation_measurements","note":"A source-named dated measurement, never combined with another source.","records_observed":0,"source":"cited_works","source_observed_at":null,"state":"measured"}],"external_citation_measurements":[],"inbound":[],"links":{"evidence":"/evidence","html":"/paper/2507.07367/citation-record","integrity":"/paper/2507.07367/integrity","json":"/paper/2507.07367/citation-record.json","paper":"/paper/2507.07367"},"outbound":[{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.410834Z","title":null,"venue":null,"work_id":"02bfaa01-e5ad-443b-826e-febb3d08ff54","year":2025},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":1,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:05.500331Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:74f5ea3bccb1317b0e5607bd66931adde9f5a3b0133091d119cf24832e72519c","observation_id":"05cbc9dd-2c67-455d-bd32-4178178a0b2f","resolution":{"observed_at":"2026-08-06T18:48:11.424166Z","resolver_source":"raw_fallback","status":"unresolved"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.384548Z","title":null,"venue":null,"work_id":"538ccef2-a54e-4f17-917c-5ab7e153af92","year":2001},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":2,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:05.592788Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:747723f9d1feac736636f2a69aac5e48af2335b2e7a297319516fe44fea85d13","observation_id":"3c51602f-9571-4d4b-bb29-d827534c7714","resolution":{"observed_at":"2026-08-06T18:48:11.390299Z","resolver_source":"raw_fallback","status":"unresolved"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.368540Z","title":"Local genetic effects on gene expression across 44 human tissues.BioRxiv, page 074450, 2016","venue":null,"work_id":"859d85ed-72b7-428c-aa96-515ec1ed46ba","year":2016},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":3,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:05.689871Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:a46b00b21b5f227f9e162f8af83b0bbde656ea40ecb34b6883365f18f3020dd8","observation_id":"7469d7a9-84a9-4d11-b0d0-d34600b10888","resolution":{"observed_at":"2026-08-06T18:48:11.373830Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.352901Z","title":"Deeploc: prediction of protein subcellu- lar localization using deep learning.Bioinformatics, 33(21):3387–3395, 2017","venue":null,"work_id":"2dc0543b-a339-4b53-b9a8-21de84bcab89","year":2017},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":4,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:05.853006Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:d33fd71ecb1574bd6a54af3c9c15e0b4b1efaee69405d307e12adad27db5f010","observation_id":"e96a1434-b5e7-4aa9-a999-9759e7d3f7aa","resolution":{"observed_at":"2026-08-06T18:48:11.357968Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.337446Z","title":"Gene ontology: tool for the unification of biology.Nature genetics, 25(1):25–29, 2000","venue":null,"work_id":"530783cd-a0d2-459c-8fa9-c76ec2bde108","year":2000},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":5,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:05.928177Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:79c2423e6720ae86acf5965b8d3a872fe714403e5042033d9e29faf162776c29","observation_id":"4fc51b24-a143-4adc-9e85-93ceb463e052","resolution":{"observed_at":"2026-08-06T18:48:11.342033Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.322339Z","title":"Multi-relational poincaré graph embeddings.Advances in neural information processing systems, 32, 2019","venue":null,"work_id":"b7188ca2-1b4b-4be9-99c8-f292f82eb043","year":2019},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":6,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:05.995995Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:81c85256d013df0884f38eb058b8c394fd1c313fc3d898ddf2922ede82d9d9c3","observation_id":"56a5cf06-cf0c-485e-85d4-71cb52cb8090","resolution":{"observed_at":"2026-08-06T18:48:11.327378Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.306346Z","title":"Translating embeddings for modeling multi- relational data.Advances in neural information processing systems, 26, 2013","venue":null,"work_id":"67d73fb5-45c0-4d03-826a-42c4d2948fd3","year":2013},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":7,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:06.075310Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:91228f3c9b227ff9e80e515b3b0931ed0223f811c9a518bac1e01828d95f05bd","observation_id":"8665b0e8-4081-4084-9106-d7f251e98398","resolution":{"observed_at":"2026-08-06T18:48:11.311799Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.290653Z","title":"Eval- uation of input data modality choices on functional gene embeddings.NAR Genomics and Bioinformat- ics, 5(4):lqad095, 2023","venue":null,"work_id":"60f1bc48-3bbd-4c2a-a7bd-dde916ed9b99","year":2023},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":8,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:06.158245Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:b7b051590d5e4dd1e6062024bea05588d76699e3ce4dc9be5c2414b350d9660c","observation_id":"5acec638-024e-4a25-9fc3-7d386fbb6546","resolution":{"observed_at":"2026-08-06T18:48:11.295652Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.274688Z","title":"Genept: a simple but effective foundation model for genes and cells built from chatgpt.bioRxiv, pages 2023–10, 2024","venue":null,"work_id":"990f0375-f653-4298-b3cf-468fe2827ad5","year":2023},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":9,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:06.266480Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:72c704885cc0354cd5a86fde677a4c82fdc577a47f1a3a31ebf84e8a1a7f9dd0","observation_id":"b6c2ce31-9fc1-4ff1-83ea-7b02a09eff8e","resolution":{"observed_at":"2026-08-06T18:48:11.279940Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.258119Z","title":"scgpt: toward building a foundation model for single- cell multi-omics using generative ai.Nature Methods, 21(8):1470–1480, 2024","venue":null,"work_id":"06cc7e64-76ea-497e-85df-1e717688d39e","year":2024},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":10,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:06.431146Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:d2842ae60d14d81221259958e1db7e8e938b557ba3fe9e73b92080ca3f892a9a","observation_id":"24b67e44-3f5b-4e70-92cc-bce7a9f0ec52","resolution":{"observed_at":"2026-08-06T18:48:11.263485Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.242450Z","title":"Gene2vec: distributed representation of genes based on co-expression.BMC genomics, 20:7–15, 2019","venue":null,"work_id":"9fd52635-0c47-4755-b9e2-2b2cb43a9724","year":2019},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":11,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:06.515198Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:5fe7fb02c5df6711a87f81e1468cfc24603a8feb46e89d99e5b1b32f57ca807d","observation_id":"89464ec7-6b36-47b5-991f-d63381b3ebfc","resolution":{"observed_at":"2026-08-06T18:48:11.247136Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.225955Z","title":"Gene expression omnibus: Ncbi gene expression and hybridization array data repository.Nucleic acids research, 30(1):207–210, 2002","venue":null,"work_id":"d02bf27d-68ed-47bc-951f-7e68b73f907b","year":2002},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":12,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:06.620665Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:60801b4c7dd21df3967bf0e4c56d1528f80ead853f29aff9fc4b8a5e58bbcb0a","observation_id":"5f263811-5ea4-478b-80ed-903855369eae","resolution":{"observed_at":"2026-08-06T18:48:11.231887Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.208645Z","title":"Prottrans: Toward understanding the language of life through self-supervised learning","venue":null,"work_id":"aa0a34c1-fcfc-4a8a-9a74-951193883fe0","year":2021},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":13,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:06.734295Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:8aa43729f54f25ac58ed0e066b0b9a05a0bc74596b721b8199b40d701ad7928c","observation_id":"f83f5114-b941-4f27-b1e0-f2ccddd079ad","resolution":{"observed_at":"2026-08-06T18:48:11.214417Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.191827Z","title":"struc2vec: Learning node representations from structural identity.CoRR, 2017","venue":null,"work_id":"ebe29bab-190d-4073-9b35-906a1f05aca8","year":2017},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":14,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:06.872125Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:368ec2ec8254de3136cb3550814a1133725980a049bff4ffe19c375774bc847d","observation_id":"9c05ffbb-d0d7-4170-b8a2-4b71391cedb6","resolution":{"observed_at":"2026-08-06T18:48:11.197186Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.175201Z","title":"Canonical correlation analysis: An overview with application to learning methods.Neu- ral computation, 16(12):2639–2664, 2004","venue":null,"work_id":"ba6e1271-8fea-4bc4-8e9f-30bf0c9f446d","year":2004},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":15,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:06.995317Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:8297e817cc08cc55d9ed60c6b1b29d504da5121720b15dccdfd435067a59d877","observation_id":"0b249885-0257-4e93-ad03-9021a3a0c8b2","resolution":{"observed_at":"2026-08-06T18:48:11.180172Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":{"arxiv_id":"2412.04075","last_updated":"2024-12-05T11:14:01Z","snapshot_observed_at":"2026-08-05T13:21:09.528411Z","submitted_at":"2024-12-05T11:14:01Z","title":"Does your model understand genes? A benchmark of gene properties for biological and text models","version":1},"cited_work":{"arxiv_id":"2412.04075","doi":null,"metadata_source":"pith","pith_arxiv_id":"2412.04075","snapshot_observed_at":"2026-08-06T18:48:08.925316Z","title":"Does your model understand genes? A benchmark of gene properties for biological and text models","venue":"cs.AI","work_id":"024bc542-04c4-4925-b155-1117583eca7e","year":2024},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":16,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:07.107114Z"},"links":{"cited_paper":"/paper/2412.04075","citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:0cda95ecc6b5fe18d040583e981e6a4aeb39fd88164b69d3d4df002519e10170","observation_id":"09ce0dd6-9151-4b9f-b7b5-ab6865648d7b","resolution":{"observed_at":"2026-08-06T18:48:08.981582Z","resolver_source":"local_arxiv","status":"verified_exact"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.158441Z","title":"The hugo gene nomenclature committee (hgnc).Human genet- ics, 109(6), 2001","venue":null,"work_id":"69c97d94-0a37-4128-92a9-7961ac599474","year":2001},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":17,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:07.172019Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:ff0e44ead0a9442f4b2762f4cf2671f6135321ce4bb38aa9d093cc6de739b523","observation_id":"d9999bda-93fd-4152-a79c-4ac0726a1cd2","resolution":{"observed_at":"2026-08-06T18:48:11.163537Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.142491Z","title":"Svcca: Singular vector canon- ical correlation analysis for deep learning dynamics 6 and interpretability.Advances in neural information processing systems, 30, 2017","venue":null,"work_id":"48f7512f-65ea-4e28-88a2-fe181ec11adc","year":2017},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":18,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:07.247972Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:5a74707d237e482c6574bf5c2ab3e124c3d6024a1c29fc16fc6d0e60740c26ed","observation_id":"6d1d414b-7a82-44a6-aee8-97b38d2bb266","resolution":{"observed_at":"2026-08-06T18:48:11.147484Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.127368Z","title":"String v10: protein–protein interaction networks, integrated over the tree of life.Nucleic acids research, 43(D1):D447– D452, 2015","venue":null,"work_id":"77680916-8fcb-495b-961f-022af2c0271e","year":2015},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":19,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:07.322305Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:12603c9f7d62e1d9caec0c14a6dda400cdb1f289eec996f4ff25afa70ca4ca7c","observation_id":"931c37fc-e06e-4bf4-bf39-2f4370329ea4","resolution":{"observed_at":"2026-08-06T18:48:11.131944Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.113471Z","title":null,"venue":null,"work_id":"8f61be4d-a190-4adb-af44-c484a9387ada","year":2019},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":20,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:07.416420Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:38c9b6abd751b97b4d90a1fa7cfe5cb293c10349edda430b90c036abbfdf0325","observation_id":"042e0753-2b42-4bba-88e2-ec5be2a99b27","resolution":{"observed_at":"2026-08-06T18:48:11.117413Z","resolver_source":"raw_fallback","status":"unresolved"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":null,"pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:07.539037Z","title":"Large language models streamline automated machine learning for clinical studies.Nature Communications, 15(1):1603, 2024","venue":null,"work_id":null,"year":2024},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":21,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:07.539037Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:4bd3ff689d0aaac7fcdf64fc04407a5837ee9a843e2506ff8884e7273baa557f","observation_id":"64e4561c-4171-4306-b51d-b54194dd8f65","resolution":{"observed_at":"2026-08-06T18:48:07.539037Z","resolver_source":null,"status":"unresolved"},"standing_notice":{"events":[],"reason":"canonical_work_link_unavailable","source_receipts":[],"state":"unavailable"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:11.088078Z","title":"The human protein atlas,","venue":null,"work_id":"8f4db36b-773c-4a1e-ba97-7c480333a009","year":null},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":22,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:07.650733Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:c40889d6f8583e339822a4b21b48ff2c453e5680faf06846754215b30e3e92fd","observation_id":"57e574b2-6699-4e39-b297-023a8e61294b","resolution":{"observed_at":"2026-08-06T18:48:11.092774Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:10.618760Z","title":"Transfer learning enables predic- tions in network biology.Nature, 618(7965):616–624, 2023","venue":null,"work_id":"de2671b6-00df-493e-97df-e0cfed12a2d7","year":2023},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":23,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:07.951853Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:a57b7444300a6848f3f0042df71dc0054cab7edb8857675486f943c09b3c8ccb","observation_id":"777463af-9db4-4366-a38f-4e5cb992e582","resolution":{"observed_at":"2026-08-06T18:48:10.736929Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:10.327761Z","title":"Defining a can- cer dependency map.Cell, 170(3):564–576, 2017","venue":null,"work_id":"3d7156d6-c42a-41b9-bc3c-fc09001356b9","year":2017},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":24,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.029114Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:9aab25dd66314c214fd5a57a812f03aa93d6d2cb668ca9979396b530435bcd85","observation_id":"c71b6073-c931-41c9-b43a-7e5ee273c979","resolution":{"observed_at":"2026-08-06T18:48:10.462440Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:10.113049Z","title":"Tissue-based map of the human pro- teome.Science, 347(6220):1260419, 2015","venue":null,"work_id":"5116cf2e-bae5-4cf8-a9dd-bfa1931df342","year":2015},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":25,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.090257Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:1cb843237964651e91576184713257dcb2ff165089953737865a1e9a0852278d","observation_id":"e795ae42-7fa8-4192-afae-768cae96f1d9","resolution":{"observed_at":"2026-08-06T18:48:10.243219Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:09.969215Z","title":"Biogps and mygene","venue":null,"work_id":"0b61a68b-5373-41ff-ba7d-20b9b7d862a2","year":2013},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":26,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.167205Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:4bfdc912f346099fd3f4f859f0192edc934aad566359b9f6e884e64a61e180be","observation_id":"1c252129-7182-4c9c-8412-756ffaaa7277","resolution":{"observed_at":"2026-08-06T18:48:10.038500Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:09.848360Z","title":"Prgefne: predicting disease-related genesbyfastnetworkembedding.Methods, 192:3–12, 2021","venue":null,"work_id":"369e2a3a-b492-43cd-802f-66f25bb49eb0","year":2021},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":27,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.253899Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:d12d13f828814895fa22e2623af758630e8bdcdc82d2f269ee585266a0e67aec","observation_id":"155db665-d311-4930-b2e4-00549aef7287","resolution":{"observed_at":"2026-08-06T18:48:09.897738Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":{"arxiv_id":"2310.03221","last_updated":"2023-10-05T00:34:56Z","snapshot_observed_at":"2026-08-08T17:50:51.996994Z","submitted_at":"2023-10-05T00:34:56Z","title":"Know2BIO: A Comprehensive Dual-View Benchmark for Evolving Biomedical Knowledge Graphs","version":1},"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":null,"pith_arxiv_id":"2310.03221","snapshot_observed_at":"2026-08-06T18:48:08.346049Z","title":"Know2bio: A comprehensive dual-view benchmark for evolving biomedical knowledge graphs.arXiv preprint arXiv:2310.03221, 2023","venue":null,"work_id":null,"year":2023},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":28,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.346049Z"},"links":{"cited_paper":"/paper/2310.03221","citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:f8c94ee15d30ffbe7170ed3dbbc41b5fc7a043fc1a3a3109f2bc4517457ede53","observation_id":"92cd8f9f-98dd-4a1a-a1b7-030a90179445","resolution":{"observed_at":"2026-08-06T18:48:08.346049Z","resolver_source":null,"status":"unresolved"},"standing_notice":{"events":[],"reason":"canonical_work_link_unavailable","source_receipts":[],"state":"unavailable"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:09.687514Z","title":"Seq2seq fingerprint: An unsupervised deep molecular embedding for drug discovery","venue":null,"work_id":"6498570f-5637-4b64-a462-481d773e74d3","year":2017},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":29,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.403781Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:b03fbe3e74db4cf902581de3b2f8d48d3c769255dd4bba7525260bb758b4bb1c","observation_id":"32f76e44-1e0f-4cf0-a022-74fe0522110b","resolution":{"observed_at":"2026-08-06T18:48:09.766173Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":{"arxiv_id":"2203.15827","last_updated":"2022-03-29T18:01:24Z","snapshot_observed_at":"2026-08-06T19:04:02.601531Z","submitted_at":"2022-03-29T18:01:24Z","title":"LinkBERT: Pretraining Language Models with Document Links","version":1},"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":null,"pith_arxiv_id":"2203.15827","snapshot_observed_at":"2026-08-06T18:48:08.520961Z","title":"Linkbert: Pretraining language models with docu- ment links.arXiv preprint arXiv:2203.15827, 2022","venue":null,"work_id":null,"year":2022},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":30,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.520961Z"},"links":{"cited_paper":"/paper/2203.15827","citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:f058e851840f47ffd28cebdc883022b32fe21aee78d589952acdb31a716aa333","observation_id":"7ee9e4f6-9a46-4963-a573-536dd8b41a9e","resolution":{"observed_at":"2026-08-06T18:48:08.520961Z","resolver_source":null,"status":"unresolved"},"standing_notice":{"events":[],"reason":"canonical_work_link_unavailable","source_receipts":[],"state":"unavailable"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:09.499092Z","title":"The ensembl rest api: Ensembl data for any language.Bioinformatics, 31(1):143–145, 2015","venue":null,"work_id":"00847ff6-c01d-4c4e-97e0-4adea7a7a07e","year":2015},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":31,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.579137Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:8ef5075e9152459d10cfd9bb7e367441f2cdce8223477c1cd62b7dd8c2a55962","observation_id":"6a4f8878-dcef-4df1-a1ec-787936f9af44","resolution":{"observed_at":"2026-08-06T18:48:09.601328Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:09.381479Z","title":"A comprehensive capability analysis of gpt-3 and gpt-3.5 series models, 2023","venue":null,"work_id":"3108cc2a-cf8f-4738-a365-dc58df02c356","year":2023},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":32,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.656228Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:bacb18e305720cabd77f314c59511002add14d37a11459375d9ae62187bac74e","observation_id":"c46f1232-b2b9-41d7-9caf-ef1aa7b97d29","resolution":{"observed_at":"2026-08-06T18:48:09.434340Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:09.245323Z","title":"Graph embedding on biomedical networks: methods, applications and evaluations.Bioinformat- ics, 36(4):1241–1251, 2020","venue":null,"work_id":"08118786-cfb7-4ca3-b4ce-8f66f6f8e2e1","year":2020},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":33,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.717413Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:5cc0c5ac18aac7563c911d61fc5eea320205f1f3593aacc0cde3f0a913709d5b","observation_id":"71d3fef4-6872-4466-9e84-35033ed66004","resolution":{"observed_at":"2026-08-06T18:48:09.312091Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:09.063084Z","title":"geneformer- 12L-30M","venue":null,"work_id":"a414f818-69b5-4672-8355-7af979e5892a","year":2025},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":34,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:08.798700Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:309618e45db7b6ac9bc3a5567d8ff3549d21648a4ead8b1ded4a7b59e8bb145d","observation_id":"435b0a74-b744-4d04-8144-80897483f4de","resolution":{"observed_at":"2026-08-06T18:48:09.166398Z","resolver_source":"raw_fallback","status":"verified_fuzzy"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}},{"citation":{"cited_paper":null,"cited_work":{"arxiv_id":null,"doi":null,"metadata_source":"raw_reference","pith_arxiv_id":null,"snapshot_observed_at":"2026-08-06T18:48:10.859536Z","title":null,"venue":null,"work_id":"6a3b6bd9-ee22-43d2-8811-55ae0d0ceed9","year":2025},"citing_paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings","version":1},"reference_index":2024,"source":"pdf_text","source_observed_at":"2026-08-06T18:48:07.837270Z"},"links":{"citing_paper":"/paper/2507.07367"},"observation_digest":"sha256:c5528cb258d74a54916b92651143b701a9c0c03f4734c8d3f4cb608e4c8dab73","observation_id":"99d0a1f4-5d01-493a-a60a-31cc993ec17d","resolution":{"observed_at":"2026-08-06T18:48:11.023539Z","resolver_source":"raw_fallback","status":"parse_uncertain"},"standing_notice":{"events":[],"observation":"No event found in the named queried sources as of 2026-08-09T06:31:02.800959+00:00.","reason":null,"source_receipts":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"state":"measured"}}],"paper":{"arxiv_id":"2507.07367","last_updated":"2025-07-10T01:18:50Z","latest_version":1,"primary_category":"q-bio.BM","snapshot_observed_at":"2026-08-06T18:40:34.537231Z","submitted_at":"2025-07-10T01:18:50Z","title":"Platform for Representation and Integration of multimodal Molecular Embeddings"},"reference_resolution":{"displayed":35,"state_counts":{"malformed_identifier":0,"metadata_mismatch":0,"parse_uncertain":1,"unresolved":6,"verified_exact":1,"verified_fuzzy":27},"total_outbound_references":35},"refusal":"A citation records a reference. It does not transfer a finding from one paper to another.","schema":"pith.paper-citation-record.v1","standing_sources":[{"observed_at":"2026-08-09T06:31:02.800959+00:00","source":"crossref"},{"observed_at":"2026-08-09T06:30:57.326959+00:00","source":"retraction_watch"}],"thesis":"As of 9 August 2026, this Paper Citation Record lists 35 of 35 outbound references and 0 inbound Pith citation observations for arXiv:2507.07367."}