{"bundle_type":"pith_open_graph_bundle","bundle_version":"1.0","pith_number":"pith:2023:5AOLPGF3SFSTZDMTGKK57CQTT2","short_pith_number":"pith:5AOLPGF3","canonical_record":{"source":{"id":"2308.16805","kind":"arxiv","version":1},"metadata":{"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"cond-mat.stat-mech","submitted_at":"2023-08-31T15:25:51Z","cross_cats_sorted":["physics.bio-ph","q-bio.QM"],"title_canon_sha256":"5b8068c9a25b4801ca0b8e3778d57a1503dd9222ed59c33869a2e1e0ce75f36d","abstract_canon_sha256":"d634b3d44ed8dd4a825631dc511ba0e2b6c52d6b4d0c23e6cdabebea30a612ec"},"schema_version":"1.0"},"canonical_sha256":"e81cb798bb91653c8d933295df8a139ea49cc46b95419136a3a70d59f8f8e140","source":{"kind":"arxiv","id":"2308.16805","version":1},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2308.16805","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"arxiv_version","alias_value":"2308.16805v1","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2308.16805","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"pith_short_12","alias_value":"5AOLPGF3SFST","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"pith_short_16","alias_value":"5AOLPGF3SFSTZDMT","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"pith_short_8","alias_value":"5AOLPGF3","created_at":"2026-07-05T06:46:39Z"}],"events":[{"event_type":"record_created","subject_pith_number":"pith:2023:5AOLPGF3SFSTZDMTGKK57CQTT2","target":"record","payload":{"canonical_record":{"source":{"id":"2308.16805","kind":"arxiv","version":1},"metadata":{"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"cond-mat.stat-mech","submitted_at":"2023-08-31T15:25:51Z","cross_cats_sorted":["physics.bio-ph","q-bio.QM"],"title_canon_sha256":"5b8068c9a25b4801ca0b8e3778d57a1503dd9222ed59c33869a2e1e0ce75f36d","abstract_canon_sha256":"d634b3d44ed8dd4a825631dc511ba0e2b6c52d6b4d0c23e6cdabebea30a612ec"},"schema_version":"1.0"},"canonical_sha256":"e81cb798bb91653c8d933295df8a139ea49cc46b95419136a3a70d59f8f8e140","receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-07-05T06:46:39.456402Z","signature_b64":"Sin2MRne21mPIidsblMrvo7xAqlam8/kXpX8kxZ9id4o4LSxXoRlRpktJDs3Cg/bmkFwnjv/7Atz1oQVT6lgCQ==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"e81cb798bb91653c8d933295df8a139ea49cc46b95419136a3a70d59f8f8e140","last_reissued_at":"2026-07-05T06:46:39.455889Z","signature_status":"signed_v1","first_computed_at":"2026-07-05T06:46:39.455889Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"source_kind":"arxiv","source_id":"2308.16805","source_version":1,"attestation_state":"computed"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-07-05T06:46:39Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"EDzj2mpg0h+YaVl26GZ2La+Kw6TClPGG0JfszsZSKpXVb6jmHADjOfcHpUzdSMSfJ3IBusPVbNr5eqjYnQzIDg==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-08-09T06:52:41.578748Z"},"content_sha256":"f4f07a94b5c0f0b749eccbdaa4efbfe3755ff97d37abf40438c333214a5d8a5a","schema_version":"1.0","event_id":"sha256:f4f07a94b5c0f0b749eccbdaa4efbfe3755ff97d37abf40438c333214a5d8a5a"},{"event_type":"graph_snapshot","subject_pith_number":"pith:2023:5AOLPGF3SFSTZDMTGKK57CQTT2","target":"graph","payload":{"graph_snapshot":{"paper":{"title":"Emergent phenomena in living systems: a statistical mechanical perspective","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":["physics.bio-ph","q-bio.QM"],"primary_cat":"cond-mat.stat-mech","authors_text":"Indrani Bose","submitted_at":"2023-08-31T15:25:51Z","abstract_excerpt":"A natural phenomenon occurring in a living system is an outcome of the dynamics of the specific biological network underlying the phenomenon. The collective dynamics have both deterministic and stochastic components. The stochastic nature of the key processes like gene expression and cell differentiation give rise to fluctuations (noise) in the levels of the biomolecules and this combined with nonlinear interactions give rise to a number of emergent phenomena. In this review, we describe and discuss some of these phenomena which have the character of phase transitions in physical systems. We s"},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"2308.16805","kind":"arxiv","version":1},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"integrity":{"clean":true,"summary":{"advisory":0,"critical":0,"by_detector":{},"informational":0},"endpoint":"/pith/2308.16805/integrity.json","findings":[],"available":true,"detectors_run":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938"},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"verdict_id":null},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-07-05T06:46:39Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"Qn41APvkmZrCrxgmHxXLIy/XIj5cHR5ft0hLJURI3Ft31PtANWN4nwr7eJROWc0BiZ5oNr/g2eCPZqcmY+1+Cg==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-08-09T06:52:41.579664Z"},"content_sha256":"5d5220cf2cc30b0dfe74149a0f890b751faf6bc2a9c0ad4713d2873b2cb97845","schema_version":"1.0","event_id":"sha256:5d5220cf2cc30b0dfe74149a0f890b751faf6bc2a9c0ad4713d2873b2cb97845"}],"timestamp_proofs":[],"mirror_hints":[{"mirror_type":"https","name":"Pith Resolver","base_url":"https://pith.science","bundle_url":"https://pith.science/pith/5AOLPGF3SFSTZDMTGKK57CQTT2/bundle.json","state_url":"https://pith.science/pith/5AOLPGF3SFSTZDMTGKK57CQTT2/state.json","well_known_bundle_url":"https://pith.science/.well-known/pith/5AOLPGF3SFSTZDMTGKK57CQTT2/bundle.json","status":"primary"}],"public_keys":[{"key_id":"pith-v1-2026-05","algorithm":"ed25519","format":"raw","public_key_b64":"stVStoiQhXFxp4s2pdzPNoqVNBMojDU/fJ2db5S3CbM=","public_key_hex":"b2d552b68890857171a78b36a5dccf368a953413288c353f7c9d9d6f94b709b3","fingerprint_sha256_b32_first128bits":"RVFV5Z2OI2J3ZUO7ERDEBCYNKS","fingerprint_sha256_hex":"8d4b5ee74e4693bcd1df2446408b0d54","rotates_at":null,"url":"https://pith.science/pith-signing-key.json","notes":"Pith uses this Ed25519 key to sign canonical record SHA-256 digests. Verify with: ed25519_verify(public_key, message=canonical_sha256_bytes, signature=base64decode(signature_b64))."}],"merge_version":"pith-open-graph-merge-v1","built_at":"2026-08-09T06:52:41Z","links":{"resolver":"https://pith.science/pith/5AOLPGF3SFSTZDMTGKK57CQTT2","bundle":"https://pith.science/pith/5AOLPGF3SFSTZDMTGKK57CQTT2/bundle.json","state":"https://pith.science/pith/5AOLPGF3SFSTZDMTGKK57CQTT2/state.json","well_known_bundle":"https://pith.science/.well-known/pith/5AOLPGF3SFSTZDMTGKK57CQTT2/bundle.json"},"state":{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2023:5AOLPGF3SFSTZDMTGKK57CQTT2","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"d634b3d44ed8dd4a825631dc511ba0e2b6c52d6b4d0c23e6cdabebea30a612ec","cross_cats_sorted":["physics.bio-ph","q-bio.QM"],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"cond-mat.stat-mech","submitted_at":"2023-08-31T15:25:51Z","title_canon_sha256":"5b8068c9a25b4801ca0b8e3778d57a1503dd9222ed59c33869a2e1e0ce75f36d"},"schema_version":"1.0","source":{"id":"2308.16805","kind":"arxiv","version":1}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2308.16805","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"arxiv_version","alias_value":"2308.16805v1","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2308.16805","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"pith_short_12","alias_value":"5AOLPGF3SFST","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"pith_short_16","alias_value":"5AOLPGF3SFSTZDMT","created_at":"2026-07-05T06:46:39Z"},{"alias_kind":"pith_short_8","alias_value":"5AOLPGF3","created_at":"2026-07-05T06:46:39Z"}],"graph_snapshots":[{"event_id":"sha256:5d5220cf2cc30b0dfe74149a0f890b751faf6bc2a9c0ad4713d2873b2cb97845","target":"graph","created_at":"2026-07-05T06:46:39Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"integrity":{"available":true,"clean":true,"detectors_run":[],"endpoint":"/pith/2308.16805/integrity.json","findings":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938","summary":{"advisory":0,"by_detector":{},"critical":0,"informational":0}},"paper":{"abstract_excerpt":"A natural phenomenon occurring in a living system is an outcome of the dynamics of the specific biological network underlying the phenomenon. The collective dynamics have both deterministic and stochastic components. The stochastic nature of the key processes like gene expression and cell differentiation give rise to fluctuations (noise) in the levels of the biomolecules and this combined with nonlinear interactions give rise to a number of emergent phenomena. In this review, we describe and discuss some of these phenomena which have the character of phase transitions in physical systems. We s","authors_text":"Indrani Bose","cross_cats":["physics.bio-ph","q-bio.QM"],"headline":"","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"cond-mat.stat-mech","submitted_at":"2023-08-31T15:25:51Z","title":"Emergent phenomena in living systems: a statistical mechanical perspective"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"2308.16805","kind":"arxiv","version":1},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:f4f07a94b5c0f0b749eccbdaa4efbfe3755ff97d37abf40438c333214a5d8a5a","target":"record","created_at":"2026-07-05T06:46:39Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"d634b3d44ed8dd4a825631dc511ba0e2b6c52d6b4d0c23e6cdabebea30a612ec","cross_cats_sorted":["physics.bio-ph","q-bio.QM"],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"cond-mat.stat-mech","submitted_at":"2023-08-31T15:25:51Z","title_canon_sha256":"5b8068c9a25b4801ca0b8e3778d57a1503dd9222ed59c33869a2e1e0ce75f36d"},"schema_version":"1.0","source":{"id":"2308.16805","kind":"arxiv","version":1}},"canonical_sha256":"e81cb798bb91653c8d933295df8a139ea49cc46b95419136a3a70d59f8f8e140","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"e81cb798bb91653c8d933295df8a139ea49cc46b95419136a3a70d59f8f8e140","first_computed_at":"2026-07-05T06:46:39.455889Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-07-05T06:46:39.455889Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"Sin2MRne21mPIidsblMrvo7xAqlam8/kXpX8kxZ9id4o4LSxXoRlRpktJDs3Cg/bmkFwnjv/7Atz1oQVT6lgCQ==","signature_status":"signed_v1","signed_at":"2026-07-05T06:46:39.456402Z","signed_message":"canonical_sha256_bytes"},"source_id":"2308.16805","source_kind":"arxiv","source_version":1}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:f4f07a94b5c0f0b749eccbdaa4efbfe3755ff97d37abf40438c333214a5d8a5a","sha256:5d5220cf2cc30b0dfe74149a0f890b751faf6bc2a9c0ad4713d2873b2cb97845"],"state_sha256":"37be1acee06164b40b5df8be2c27dcda2521f0775173818adecd581d199b0085"},"bundle_signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"S1qQhxcA1trPYmiObPUWFAr8hEDAKOn0O7hWbdMxAjadtH2ZFzZwaU6g7vdNCPbv3UOR76JmdBJWVcw1bYE8Bg==","signed_message":"bundle_sha256_bytes","signed_at":"2026-08-09T06:52:41.597814Z","bundle_sha256":"117fafea34c5b189e19f05dcfb2f7f33b6553646278c4a145aba8e9bc13a110e"}}