{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2013:5LHAPKSW5O4CYJ7MZ3EGRKOZZN","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"3be04664325da3eebe087221b64ae8843c9b64f843c1fcbdead39bc2ba5e2e4b","cross_cats_sorted":[],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2013-06-10T16:26:10Z","title_canon_sha256":"2ed57d00954e3efc9c5ff79a321133f74ad03e2561664c6b3b7bc3f46d917459"},"schema_version":"1.0","source":{"id":"1306.2243","kind":"arxiv","version":1}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"1306.2243","created_at":"2026-05-18T03:21:22Z"},{"alias_kind":"arxiv_version","alias_value":"1306.2243v1","created_at":"2026-05-18T03:21:22Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1306.2243","created_at":"2026-05-18T03:21:22Z"},{"alias_kind":"pith_short_12","alias_value":"5LHAPKSW5O4C","created_at":"2026-05-18T12:27:34Z"},{"alias_kind":"pith_short_16","alias_value":"5LHAPKSW5O4CYJ7M","created_at":"2026-05-18T12:27:34Z"},{"alias_kind":"pith_short_8","alias_value":"5LHAPKSW","created_at":"2026-05-18T12:27:34Z"}],"graph_snapshots":[{"event_id":"sha256:adc960c65ac0c249133c82ea8fca492a98a0ee168e5c858a34e7ffed26284ae5","target":"graph","created_at":"2026-05-18T03:21:22Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"paper":{"abstract_excerpt":"Here we present mendelFix, a Perl script for checking Mendelian errors in genome-wide SNP data of trio designs. The program takes 12-recoded PLINK PED and MAP files as input to calculate a series of summary statistics for Mendelian errors, sets missing offspring genotypes that present Mendelian inconsistencies, and implements a simplistic procedure to infer missing genotypes using parent information. The program can be easily incorporated in any pipeline for family-based SNP data analysis, and is distributed as free software under the GNU General Public License.","authors_text":"Adriana Santana do Carmo, Francine Campagnari, Jos\\'e Antonio Vinsintin, Jos\\'e Fernando Garcia, Rodrigo Vitorio Alonso, Yuri Tani Utsunomiya","cross_cats":[],"headline":"","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2013-06-10T16:26:10Z","title":"mendelFix: a Perl script for checking Mendelian errors in high density SNP data of trio designs"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1306.2243","kind":"arxiv","version":1},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:4fec2a3776982db2ef7922dc8ff03e725a42f5ea3dc229b52e4d494a9b3ba811","target":"record","created_at":"2026-05-18T03:21:22Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"3be04664325da3eebe087221b64ae8843c9b64f843c1fcbdead39bc2ba5e2e4b","cross_cats_sorted":[],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2013-06-10T16:26:10Z","title_canon_sha256":"2ed57d00954e3efc9c5ff79a321133f74ad03e2561664c6b3b7bc3f46d917459"},"schema_version":"1.0","source":{"id":"1306.2243","kind":"arxiv","version":1}},"canonical_sha256":"eace07aa56ebb82c27eccec868a9d9cb602e58f1d1a70cc0eb43fa67d3a28b2f","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"eace07aa56ebb82c27eccec868a9d9cb602e58f1d1a70cc0eb43fa67d3a28b2f","first_computed_at":"2026-05-18T03:21:22.015302Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-05-18T03:21:22.015302Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"VcLhPHqMrrjjPxakB7Yo7CFlaJSTtBWov5GySf/XZum3Z0uNXhXZxNHaUkxgudBCqs8Fy8AMRoFDabKzwxn/Aw==","signature_status":"signed_v1","signed_at":"2026-05-18T03:21:22.016565Z","signed_message":"canonical_sha256_bytes"},"source_id":"1306.2243","source_kind":"arxiv","source_version":1}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:4fec2a3776982db2ef7922dc8ff03e725a42f5ea3dc229b52e4d494a9b3ba811","sha256:adc960c65ac0c249133c82ea8fca492a98a0ee168e5c858a34e7ffed26284ae5"],"state_sha256":"bee4eeec09ef8281ce9230eb1405fba58dfbe2584c147ffd0f32d8de51dfeecb"}