{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2024:FB7ZJ627XD4MG2WE4MDBMS4HEJ","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"14146de1e37e2c2efac38d3feb12289bfa7574d0bc0acc8443be7c0770dbe218","cross_cats_sorted":["cs.AR"],"license":"http://creativecommons.org/licenses/by-sa/4.0/","primary_cat":"cs.DC","submitted_at":"2024-09-20T09:53:33Z","title_canon_sha256":"c01a335afd2f319f46a6def0d7c43b3182ff26dc11f350f3202f02b3cb1e5cf2"},"schema_version":"1.0","source":{"id":"2409.13361","kind":"arxiv","version":1}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2409.13361","created_at":"2026-07-05T09:09:33Z"},{"alias_kind":"arxiv_version","alias_value":"2409.13361v1","created_at":"2026-07-05T09:09:33Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2409.13361","created_at":"2026-07-05T09:09:33Z"},{"alias_kind":"pith_short_12","alias_value":"FB7ZJ627XD4M","created_at":"2026-07-05T09:09:33Z"},{"alias_kind":"pith_short_16","alias_value":"FB7ZJ627XD4MG2WE","created_at":"2026-07-05T09:09:33Z"},{"alias_kind":"pith_short_8","alias_value":"FB7ZJ627","created_at":"2026-07-05T09:09:33Z"}],"graph_snapshots":[{"event_id":"sha256:90e35142a79f332c49f656246a9e3425ad7814541d0a7258bacf33bb3c6316a6","target":"graph","created_at":"2026-07-05T09:09:33Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"integrity":{"available":true,"clean":true,"detectors_run":[],"endpoint":"/pith/2409.13361/integrity.json","findings":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938","summary":{"advisory":0,"by_detector":{},"critical":0,"informational":0}},"paper":{"abstract_excerpt":"Mass spectrometry (MS) is essential for protein analysis but faces significant challenges with large datasets and complex post-translational modifications, resulting in difficulties in spectral identification. Open Modification Search (OMS) improves the analysis of these modifications. We present RapidOMS, a solution leveraging the Samsung SmartSSD, which integrates SSD and FPGA in a near-storage configuration to minimize data movement and enhance the efficiency of large-scale database searching. RapidOMS employs hyperdimensional computing (HDC), a brain-inspired, high-dimensional data process","authors_text":"Niema Moshiri, Sang-Woo Jun, Sumukh Pinge, Tajana Rosing, Weihong Xu, Wout Bittremieux","cross_cats":["cs.AR"],"headline":"","license":"http://creativecommons.org/licenses/by-sa/4.0/","primary_cat":"cs.DC","submitted_at":"2024-09-20T09:53:33Z","title":"RapidOMS: FPGA-based Open Modification Spectral Library Searching with HD Computing"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"2409.13361","kind":"arxiv","version":1},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:6ae2b72a0051e686cbb3eedb8f2005db9eaf9aa48981a354543d9153e6ddef0b","target":"record","created_at":"2026-07-05T09:09:33Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"14146de1e37e2c2efac38d3feb12289bfa7574d0bc0acc8443be7c0770dbe218","cross_cats_sorted":["cs.AR"],"license":"http://creativecommons.org/licenses/by-sa/4.0/","primary_cat":"cs.DC","submitted_at":"2024-09-20T09:53:33Z","title_canon_sha256":"c01a335afd2f319f46a6def0d7c43b3182ff26dc11f350f3202f02b3cb1e5cf2"},"schema_version":"1.0","source":{"id":"2409.13361","kind":"arxiv","version":1}},"canonical_sha256":"287f94fb5fb8f8c36ac4e306164b872241304457237281fee1f59b7ed827528c","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"287f94fb5fb8f8c36ac4e306164b872241304457237281fee1f59b7ed827528c","first_computed_at":"2026-07-05T09:09:33.931734Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-07-05T09:09:33.931734Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"5BGWUocU1WO9FxFr7DgfRh+t9gDfMbAyVCtcisKsOICdxa/oTCASrKJNPxu38LDtha5g4nnXo0iJ1TyA0O7FAg==","signature_status":"signed_v1","signed_at":"2026-07-05T09:09:33.932202Z","signed_message":"canonical_sha256_bytes"},"source_id":"2409.13361","source_kind":"arxiv","source_version":1}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:6ae2b72a0051e686cbb3eedb8f2005db9eaf9aa48981a354543d9153e6ddef0b","sha256:90e35142a79f332c49f656246a9e3425ad7814541d0a7258bacf33bb3c6316a6"],"state_sha256":"f5a64929e3102b9fc0aa7c00840f660ecc25d7810cecaef90a19330c08fef447"}