{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2011:GLIVOG5SPZCXRFKXTWK7BD5GYF","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"fa35248b51ca2fe123f27ea3b1411e15279bbe8dfc3a8d78f320186d192118f8","cross_cats_sorted":["cs.CE","cs.DS"],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2011-07-30T07:10:58Z","title_canon_sha256":"014f6622e5139141cd8d2f6770692e86bac481ea6bf82243d504d06545e37030"},"schema_version":"1.0","source":{"id":"1108.0047","kind":"arxiv","version":2}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"1108.0047","created_at":"2026-05-18T03:48:48Z"},{"alias_kind":"arxiv_version","alias_value":"1108.0047v2","created_at":"2026-05-18T03:48:48Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1108.0047","created_at":"2026-05-18T03:48:48Z"},{"alias_kind":"pith_short_12","alias_value":"GLIVOG5SPZCX","created_at":"2026-05-18T12:26:30Z"},{"alias_kind":"pith_short_16","alias_value":"GLIVOG5SPZCXRFKX","created_at":"2026-05-18T12:26:30Z"},{"alias_kind":"pith_short_8","alias_value":"GLIVOG5S","created_at":"2026-05-18T12:26:30Z"}],"graph_snapshots":[{"event_id":"sha256:15a58b9275615aaa0b30df79243c97c52277aea8e9718b3d7837f98f08ade8d7","target":"graph","created_at":"2026-05-18T03:48:48Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"paper":{"abstract_excerpt":"Next-generation sequencing (NGS) technologies allow new methodologies for alternative splicing (AS) analysis. Current computational methods for AS from NGS data are mainly focused on predicting splice site junctions or de novo assembly of full-length transcripts. These methods are computationally expensive and produce a huge number of full-length transcripts or splice junctions, spanning the whole genome of organisms. Thus summarizing such data into the different gene structures and AS events of the expressed genes is an hard task.\n  To face this issue in this paper we investigate the computat","authors_text":"Gianluca Della Vedova, Paola Bonizzoni, Raffaella Rizzi, Stefano Beretta","cross_cats":["cs.CE","cs.DS"],"headline":"","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2011-07-30T07:10:58Z","title":"Reconstructing Isoform Graphs from RNA-Seq data"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1108.0047","kind":"arxiv","version":2},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:600bec7527d30979dc43938c938e1d698f27282e42cc0ed52fd52ae4ed1e29b4","target":"record","created_at":"2026-05-18T03:48:48Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"fa35248b51ca2fe123f27ea3b1411e15279bbe8dfc3a8d78f320186d192118f8","cross_cats_sorted":["cs.CE","cs.DS"],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2011-07-30T07:10:58Z","title_canon_sha256":"014f6622e5139141cd8d2f6770692e86bac481ea6bf82243d504d06545e37030"},"schema_version":"1.0","source":{"id":"1108.0047","kind":"arxiv","version":2}},"canonical_sha256":"32d1571bb27e457895579d95f08fa6c1701d0a8e157db6347f55707233503fa8","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"32d1571bb27e457895579d95f08fa6c1701d0a8e157db6347f55707233503fa8","first_computed_at":"2026-05-18T03:48:48.134722Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-05-18T03:48:48.134722Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"COjktvOxH0b/kIjIz6/GmnR/gZMwjKI09ctUEMd1VbweRySxtwQbuDWZVp7XKXMS22HLndrxDuBX8ZRbR5MVCg==","signature_status":"signed_v1","signed_at":"2026-05-18T03:48:48.135369Z","signed_message":"canonical_sha256_bytes"},"source_id":"1108.0047","source_kind":"arxiv","source_version":2}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:600bec7527d30979dc43938c938e1d698f27282e42cc0ed52fd52ae4ed1e29b4","sha256:15a58b9275615aaa0b30df79243c97c52277aea8e9718b3d7837f98f08ade8d7"],"state_sha256":"8dfe5d307c30ccc47cfde12c327e51f8e7545b7e0fe80fdc058180e1ef6a5264"}