{"record_type":"pith_number_record","schema_url":"https://pith.science/schemas/pith-number/v1.json","pith_number":"pith:2017:QONO5XVL5BJKJNEWHXAIRI5PMX","short_pith_number":"pith:QONO5XVL","schema_version":"1.0","canonical_sha256":"839aeedeabe852a4b4963dc088a3af65f579fa824d415635bad576f609597ab5","source":{"kind":"arxiv","id":"1711.05054","version":2},"attestation_state":"computed","paper":{"title":"Effect of 8th Chromophore: A Comprehensive Study of Excitation Energy Transfer in FMO complex","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":[],"primary_cat":"physics.bio-ph","authors_text":"Davinder Singh, Shubhrangshu Dasgupta","submitted_at":"2017-11-14T10:54:35Z","abstract_excerpt":"The excitation energy transfer (EET) in Fenna-Matthews-Olson (FMO) complex has been investigated in the presence of realistic inhomogeneous protein environment around different bacteriochlorophyll-a (BChla) sites of a 8-site monomer. We studied the effect of initial coherence and the 8th chromophore on the EET dynamics considering relative orientation of transition dipole moments of all the BChla sites. We choose femtosecond coherent laser pulse to prepare initial coherent superposition state. Our non-Markovian simulation reveals that the initial coherence between excited states of BChla sites"},"verification_status":{"content_addressed":true,"pith_receipt":true,"author_attested":false,"weak_author_claims":0,"strong_author_claims":0,"externally_anchored":false,"storage_verified":false,"citation_signatures":0,"replication_records":0,"graph_snapshot":true,"references_resolved":false,"formal_links_present":false},"canonical_record":{"source":{"id":"1711.05054","kind":"arxiv","version":2},"metadata":{"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"physics.bio-ph","submitted_at":"2017-11-14T10:54:35Z","cross_cats_sorted":[],"title_canon_sha256":"df0dcaacaae67a84b81cb5f1efcb0179397323fd8a4b6ca104a14a0a38e48b40","abstract_canon_sha256":"23b3e8ff15363c17042f6bf6bf6e730937aacbad3952c31a5a01d30daf40f4b6"},"schema_version":"1.0"},"receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-05-18T00:15:52.236694Z","signature_b64":"FHCANcRQZLe88a6uow4ASpV92Mb8yIZwDwrfP6zHenLVyOOwpew1RtKKcHlb3cv7r1e3D8+wT4butKEe2vmjCw==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"839aeedeabe852a4b4963dc088a3af65f579fa824d415635bad576f609597ab5","last_reissued_at":"2026-05-18T00:15:52.235920Z","signature_status":"signed_v1","first_computed_at":"2026-05-18T00:15:52.235920Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"graph_snapshot":{"paper":{"title":"Effect of 8th Chromophore: A Comprehensive Study of Excitation Energy Transfer in FMO complex","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":[],"primary_cat":"physics.bio-ph","authors_text":"Davinder Singh, Shubhrangshu Dasgupta","submitted_at":"2017-11-14T10:54:35Z","abstract_excerpt":"The excitation energy transfer (EET) in Fenna-Matthews-Olson (FMO) complex has been investigated in the presence of realistic inhomogeneous protein environment around different bacteriochlorophyll-a (BChla) sites of a 8-site monomer. We studied the effect of initial coherence and the 8th chromophore on the EET dynamics considering relative orientation of transition dipole moments of all the BChla sites. We choose femtosecond coherent laser pulse to prepare initial coherent superposition state. Our non-Markovian simulation reveals that the initial coherence between excited states of BChla sites"},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1711.05054","kind":"arxiv","version":2},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"aliases":[{"alias_kind":"arxiv","alias_value":"1711.05054","created_at":"2026-05-18T00:15:52.236044+00:00"},{"alias_kind":"arxiv_version","alias_value":"1711.05054v2","created_at":"2026-05-18T00:15:52.236044+00:00"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1711.05054","created_at":"2026-05-18T00:15:52.236044+00:00"},{"alias_kind":"pith_short_12","alias_value":"QONO5XVL5BJK","created_at":"2026-05-18T12:31:39.905425+00:00"},{"alias_kind":"pith_short_16","alias_value":"QONO5XVL5BJKJNEW","created_at":"2026-05-18T12:31:39.905425+00:00"},{"alias_kind":"pith_short_8","alias_value":"QONO5XVL","created_at":"2026-05-18T12:31:39.905425+00:00"}],"events":[],"event_summary":{},"paper_claims":[],"inbound_citations":{"count":0,"internal_anchor_count":0,"sample":[]},"formal_canon":{"evidence_count":0,"sample":[],"anchors":[]},"links":{"html":"https://pith.science/pith/QONO5XVL5BJKJNEWHXAIRI5PMX","json":"https://pith.science/pith/QONO5XVL5BJKJNEWHXAIRI5PMX.json","graph_json":"https://pith.science/api/pith-number/QONO5XVL5BJKJNEWHXAIRI5PMX/graph.json","events_json":"https://pith.science/api/pith-number/QONO5XVL5BJKJNEWHXAIRI5PMX/events.json","paper":"https://pith.science/paper/QONO5XVL"},"agent_actions":{"view_html":"https://pith.science/pith/QONO5XVL5BJKJNEWHXAIRI5PMX","download_json":"https://pith.science/pith/QONO5XVL5BJKJNEWHXAIRI5PMX.json","view_paper":"https://pith.science/paper/QONO5XVL","resolve_alias":"https://pith.science/api/pith-number/resolve?arxiv=1711.05054&json=true","fetch_graph":"https://pith.science/api/pith-number/QONO5XVL5BJKJNEWHXAIRI5PMX/graph.json","fetch_events":"https://pith.science/api/pith-number/QONO5XVL5BJKJNEWHXAIRI5PMX/events.json","actions":{"anchor_timestamp":"https://pith.science/pith/QONO5XVL5BJKJNEWHXAIRI5PMX/action/timestamp_anchor","attest_storage":"https://pith.science/pith/QONO5XVL5BJKJNEWHXAIRI5PMX/action/storage_attestation","attest_author":"https://pith.science/pith/QONO5XVL5BJKJNEWHXAIRI5PMX/action/author_attestation","sign_citation":"https://pith.science/pith/QONO5XVL5BJKJNEWHXAIRI5PMX/action/citation_signature","submit_replication":"https://pith.science/pith/QONO5XVL5BJKJNEWHXAIRI5PMX/action/replication_record"}},"created_at":"2026-05-18T00:15:52.236044+00:00","updated_at":"2026-05-18T00:15:52.236044+00:00"}