{"bundle_type":"pith_open_graph_bundle","bundle_version":"1.0","pith_number":"pith:2012:SO2HEGDX63Y6IZ6LTKPNBNPVKP","short_pith_number":"pith:SO2HEGDX","canonical_record":{"source":{"id":"1203.0937","kind":"arxiv","version":2},"metadata":{"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2012-03-05T14:51:41Z","cross_cats_sorted":["stat.AP"],"title_canon_sha256":"d11cbe2c80bbc07c825ea9de4e10d6eba7de72733053a114ed226229a13111ac","abstract_canon_sha256":"57c145d3690cbe6968dea4b5c8fa620525ba9e1f1966f87fe713c2b05f272806"},"schema_version":"1.0"},"canonical_sha256":"93b4721877f6f1e467cb9a9ed0b5f553ecb7d45f1289dc56047b38868f0961d9","source":{"kind":"arxiv","id":"1203.0937","version":2},"source_aliases":[{"alias_kind":"arxiv","alias_value":"1203.0937","created_at":"2026-05-18T02:29:32Z"},{"alias_kind":"arxiv_version","alias_value":"1203.0937v2","created_at":"2026-05-18T02:29:32Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1203.0937","created_at":"2026-05-18T02:29:32Z"},{"alias_kind":"pith_short_12","alias_value":"SO2HEGDX63Y6","created_at":"2026-05-18T12:27:20Z"},{"alias_kind":"pith_short_16","alias_value":"SO2HEGDX63Y6IZ6L","created_at":"2026-05-18T12:27:20Z"},{"alias_kind":"pith_short_8","alias_value":"SO2HEGDX","created_at":"2026-05-18T12:27:20Z"}],"events":[{"event_type":"record_created","subject_pith_number":"pith:2012:SO2HEGDX63Y6IZ6LTKPNBNPVKP","target":"record","payload":{"canonical_record":{"source":{"id":"1203.0937","kind":"arxiv","version":2},"metadata":{"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2012-03-05T14:51:41Z","cross_cats_sorted":["stat.AP"],"title_canon_sha256":"d11cbe2c80bbc07c825ea9de4e10d6eba7de72733053a114ed226229a13111ac","abstract_canon_sha256":"57c145d3690cbe6968dea4b5c8fa620525ba9e1f1966f87fe713c2b05f272806"},"schema_version":"1.0"},"canonical_sha256":"93b4721877f6f1e467cb9a9ed0b5f553ecb7d45f1289dc56047b38868f0961d9","receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-05-18T02:29:32.632582Z","signature_b64":"79HoRdlPgL72Dp2L94ikz3urYoT4cmq+53b5TOVtNhazSH0bzCNvqpU0u0Y3nnUTaK/sKaDKXEt7TeVDVagJCQ==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"93b4721877f6f1e467cb9a9ed0b5f553ecb7d45f1289dc56047b38868f0961d9","last_reissued_at":"2026-05-18T02:29:32.632142Z","signature_status":"signed_v1","first_computed_at":"2026-05-18T02:29:32.632142Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"source_kind":"arxiv","source_id":"1203.0937","source_version":2,"attestation_state":"computed"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-05-18T02:29:32Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"Cz4W/UoJxifwEvTGKKKj2uyieuhr2+8SUc4bdIHtINiy4+DtmwfVKChf1IawbGBE+rinqN2ryxl0Ea3BmajhDA==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-05-24T18:49:55.909869Z"},"content_sha256":"08411bfebe28a4efb23838fdd18282712d44fe82686dac52a102e262c333420d","schema_version":"1.0","event_id":"sha256:08411bfebe28a4efb23838fdd18282712d44fe82686dac52a102e262c333420d"},{"event_type":"graph_snapshot","subject_pith_number":"pith:2012:SO2HEGDX63Y6IZ6LTKPNBNPVKP","target":"graph","payload":{"graph_snapshot":{"paper":{"title":"CLEVER: Clique-Enumerating Variant Finder","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":["stat.AP"],"primary_cat":"q-bio.GN","authors_text":"Alexander Schliep, Alexander Sch\\\"onhuth, Gunnar Klau, Ivan Costa, Markus Bauer, Stefan Canzar, Tobias Marschall","submitted_at":"2012-03-05T14:51:41Z","abstract_excerpt":"Next-generation sequencing techniques have facilitated a large scale analysis of human genetic variation. Despite the advances in sequencing speeds, the computational discovery of structural variants is not yet standard. It is likely that many variants have remained undiscovered in most sequenced individuals. Here we present a novel internal segment size based approach, which organizes all, including also concordant reads into a read alignment graph where max-cliques represent maximal contradiction-free groups of alignments. A specifically engineered algorithm then enumerates all max-cliques a"},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1203.0937","kind":"arxiv","version":2},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"verdict_id":null},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-05-18T02:29:32Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"5X897bSTPWvEKgyzK3NtmdYCiywmcDEvmyQmOD+1CfbgkHjjVEaHApKeUHYczbrAyP2YoBG+mQTGNvydrEkXCg==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-05-24T18:49:55.910576Z"},"content_sha256":"ecf3bd13c5d24946e622dfc27a728b3c64e00974f615b07101bede43d65be78e","schema_version":"1.0","event_id":"sha256:ecf3bd13c5d24946e622dfc27a728b3c64e00974f615b07101bede43d65be78e"}],"timestamp_proofs":[],"mirror_hints":[{"mirror_type":"https","name":"Pith Resolver","base_url":"https://pith.science","bundle_url":"https://pith.science/pith/SO2HEGDX63Y6IZ6LTKPNBNPVKP/bundle.json","state_url":"https://pith.science/pith/SO2HEGDX63Y6IZ6LTKPNBNPVKP/state.json","well_known_bundle_url":"https://pith.science/.well-known/pith/SO2HEGDX63Y6IZ6LTKPNBNPVKP/bundle.json","status":"primary"}],"public_keys":[{"key_id":"pith-v1-2026-05","algorithm":"ed25519","format":"raw","public_key_b64":"stVStoiQhXFxp4s2pdzPNoqVNBMojDU/fJ2db5S3CbM=","public_key_hex":"b2d552b68890857171a78b36a5dccf368a953413288c353f7c9d9d6f94b709b3","fingerprint_sha256_b32_first128bits":"RVFV5Z2OI2J3ZUO7ERDEBCYNKS","fingerprint_sha256_hex":"8d4b5ee74e4693bcd1df2446408b0d54","rotates_at":null,"url":"https://pith.science/pith-signing-key.json","notes":"Pith uses this Ed25519 key to sign canonical record SHA-256 digests. Verify with: ed25519_verify(public_key, message=canonical_sha256_bytes, signature=base64decode(signature_b64))."}],"merge_version":"pith-open-graph-merge-v1","built_at":"2026-05-24T18:49:55Z","links":{"resolver":"https://pith.science/pith/SO2HEGDX63Y6IZ6LTKPNBNPVKP","bundle":"https://pith.science/pith/SO2HEGDX63Y6IZ6LTKPNBNPVKP/bundle.json","state":"https://pith.science/pith/SO2HEGDX63Y6IZ6LTKPNBNPVKP/state.json","well_known_bundle":"https://pith.science/.well-known/pith/SO2HEGDX63Y6IZ6LTKPNBNPVKP/bundle.json"},"state":{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2012:SO2HEGDX63Y6IZ6LTKPNBNPVKP","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"57c145d3690cbe6968dea4b5c8fa620525ba9e1f1966f87fe713c2b05f272806","cross_cats_sorted":["stat.AP"],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2012-03-05T14:51:41Z","title_canon_sha256":"d11cbe2c80bbc07c825ea9de4e10d6eba7de72733053a114ed226229a13111ac"},"schema_version":"1.0","source":{"id":"1203.0937","kind":"arxiv","version":2}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"1203.0937","created_at":"2026-05-18T02:29:32Z"},{"alias_kind":"arxiv_version","alias_value":"1203.0937v2","created_at":"2026-05-18T02:29:32Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1203.0937","created_at":"2026-05-18T02:29:32Z"},{"alias_kind":"pith_short_12","alias_value":"SO2HEGDX63Y6","created_at":"2026-05-18T12:27:20Z"},{"alias_kind":"pith_short_16","alias_value":"SO2HEGDX63Y6IZ6L","created_at":"2026-05-18T12:27:20Z"},{"alias_kind":"pith_short_8","alias_value":"SO2HEGDX","created_at":"2026-05-18T12:27:20Z"}],"graph_snapshots":[{"event_id":"sha256:ecf3bd13c5d24946e622dfc27a728b3c64e00974f615b07101bede43d65be78e","target":"graph","created_at":"2026-05-18T02:29:32Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"paper":{"abstract_excerpt":"Next-generation sequencing techniques have facilitated a large scale analysis of human genetic variation. Despite the advances in sequencing speeds, the computational discovery of structural variants is not yet standard. It is likely that many variants have remained undiscovered in most sequenced individuals. Here we present a novel internal segment size based approach, which organizes all, including also concordant reads into a read alignment graph where max-cliques represent maximal contradiction-free groups of alignments. A specifically engineered algorithm then enumerates all max-cliques a","authors_text":"Alexander Schliep, Alexander Sch\\\"onhuth, Gunnar Klau, Ivan Costa, Markus Bauer, Stefan Canzar, Tobias Marschall","cross_cats":["stat.AP"],"headline":"","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2012-03-05T14:51:41Z","title":"CLEVER: Clique-Enumerating Variant Finder"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1203.0937","kind":"arxiv","version":2},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:08411bfebe28a4efb23838fdd18282712d44fe82686dac52a102e262c333420d","target":"record","created_at":"2026-05-18T02:29:32Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"57c145d3690cbe6968dea4b5c8fa620525ba9e1f1966f87fe713c2b05f272806","cross_cats_sorted":["stat.AP"],"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"q-bio.GN","submitted_at":"2012-03-05T14:51:41Z","title_canon_sha256":"d11cbe2c80bbc07c825ea9de4e10d6eba7de72733053a114ed226229a13111ac"},"schema_version":"1.0","source":{"id":"1203.0937","kind":"arxiv","version":2}},"canonical_sha256":"93b4721877f6f1e467cb9a9ed0b5f553ecb7d45f1289dc56047b38868f0961d9","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"93b4721877f6f1e467cb9a9ed0b5f553ecb7d45f1289dc56047b38868f0961d9","first_computed_at":"2026-05-18T02:29:32.632142Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-05-18T02:29:32.632142Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"79HoRdlPgL72Dp2L94ikz3urYoT4cmq+53b5TOVtNhazSH0bzCNvqpU0u0Y3nnUTaK/sKaDKXEt7TeVDVagJCQ==","signature_status":"signed_v1","signed_at":"2026-05-18T02:29:32.632582Z","signed_message":"canonical_sha256_bytes"},"source_id":"1203.0937","source_kind":"arxiv","source_version":2}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:08411bfebe28a4efb23838fdd18282712d44fe82686dac52a102e262c333420d","sha256:ecf3bd13c5d24946e622dfc27a728b3c64e00974f615b07101bede43d65be78e"],"state_sha256":"f110d13ed407f269697fb1c48a06f8aef5fb84c55b3a233650aca0c32a41c815"},"bundle_signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"iRXzk1/gJUMC8JqUG4xExNHBL5YVyo9FzE/YTZIn0Y29u+lJY51ba8wuYS/PzGotfKlyPfEktLjwOyzsO1PBDA==","signed_message":"bundle_sha256_bytes","signed_at":"2026-05-24T18:49:55.914236Z","bundle_sha256":"b89358ec5ecd11e6f037e71ece7ae23f59c1c5e02277376fceff879fb04dfe8d"}}