{"record_type":"pith_number_record","schema_url":"https://pith.science/schemas/pith-number/v1.json","pith_number":"pith:2018:TL6XJCX7LJWBS4ZCGNVEHGRL6V","short_pith_number":"pith:TL6XJCX7","schema_version":"1.0","canonical_sha256":"9afd748aff5a6c197322336a439a2bf5535952368f976f4b46448359c73d37a8","source":{"kind":"arxiv","id":"1806.06804","version":2},"attestation_state":"computed","paper":{"title":"Optimal coarse-grained site selection in elastic network models of biomolecules","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":[],"primary_cat":"cond-mat.soft","authors_text":"Changjiang Liu, Markus Deserno, Patrick Diggins IV, Raffaello Potestio","submitted_at":"2018-06-18T16:19:47Z","abstract_excerpt":"Elastic network models, simple structure-based representations of biomolecules where atoms interact via short-range harmonic potentials, provide great insight into a molecule's internal dynamics and mechanical properties at extremely low computational cost. Their efficiency and effectiveness have made them a pivotal instrument in the computer-aided study of proteins and, since a few years, also of nucleic acids. In general, the coarse-grained sites, i.e. those effective force centres onto which the all-atom structure is mapped, are constructed based on intuitive rules: a typical choice for pro"},"verification_status":{"content_addressed":true,"pith_receipt":true,"author_attested":false,"weak_author_claims":0,"strong_author_claims":0,"externally_anchored":false,"storage_verified":false,"citation_signatures":0,"replication_records":0,"graph_snapshot":true,"references_resolved":false,"formal_links_present":false},"canonical_record":{"source":{"id":"1806.06804","kind":"arxiv","version":2},"metadata":{"license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","primary_cat":"cond-mat.soft","submitted_at":"2018-06-18T16:19:47Z","cross_cats_sorted":[],"title_canon_sha256":"6da3909cde4b7e015de30de2554847ce83409d74227638fef611031f837a6d95","abstract_canon_sha256":"a2fe9c642993572e0e18acf68142c29567a3e071a6d7b199be00d9d04d931aa2"},"schema_version":"1.0"},"receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-05-17T23:58:38.837830Z","signature_b64":"5qQVREJbtX215VxEfLL84kxs3pqfUe/9rCZ0xB0Fo3NXAASbVF14SokzZVNMuz8it33PYxkdk2oAgDYWlptjBA==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"9afd748aff5a6c197322336a439a2bf5535952368f976f4b46448359c73d37a8","last_reissued_at":"2026-05-17T23:58:38.837087Z","signature_status":"signed_v1","first_computed_at":"2026-05-17T23:58:38.837087Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"graph_snapshot":{"paper":{"title":"Optimal coarse-grained site selection in elastic network models of biomolecules","license":"http://arxiv.org/licenses/nonexclusive-distrib/1.0/","headline":"","cross_cats":[],"primary_cat":"cond-mat.soft","authors_text":"Changjiang Liu, Markus Deserno, Patrick Diggins IV, Raffaello Potestio","submitted_at":"2018-06-18T16:19:47Z","abstract_excerpt":"Elastic network models, simple structure-based representations of biomolecules where atoms interact via short-range harmonic potentials, provide great insight into a molecule's internal dynamics and mechanical properties at extremely low computational cost. Their efficiency and effectiveness have made them a pivotal instrument in the computer-aided study of proteins and, since a few years, also of nucleic acids. In general, the coarse-grained sites, i.e. those effective force centres onto which the all-atom structure is mapped, are constructed based on intuitive rules: a typical choice for pro"},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"1806.06804","kind":"arxiv","version":2},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"aliases":[{"alias_kind":"arxiv","alias_value":"1806.06804","created_at":"2026-05-17T23:58:38.837227+00:00"},{"alias_kind":"arxiv_version","alias_value":"1806.06804v2","created_at":"2026-05-17T23:58:38.837227+00:00"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.1806.06804","created_at":"2026-05-17T23:58:38.837227+00:00"},{"alias_kind":"pith_short_12","alias_value":"TL6XJCX7LJWB","created_at":"2026-05-18T12:32:53.628368+00:00"},{"alias_kind":"pith_short_16","alias_value":"TL6XJCX7LJWBS4ZC","created_at":"2026-05-18T12:32:53.628368+00:00"},{"alias_kind":"pith_short_8","alias_value":"TL6XJCX7","created_at":"2026-05-18T12:32:53.628368+00:00"}],"events":[],"event_summary":{},"paper_claims":[],"inbound_citations":{"count":0,"internal_anchor_count":0,"sample":[]},"formal_canon":{"evidence_count":0,"sample":[],"anchors":[]},"links":{"html":"https://pith.science/pith/TL6XJCX7LJWBS4ZCGNVEHGRL6V","json":"https://pith.science/pith/TL6XJCX7LJWBS4ZCGNVEHGRL6V.json","graph_json":"https://pith.science/api/pith-number/TL6XJCX7LJWBS4ZCGNVEHGRL6V/graph.json","events_json":"https://pith.science/api/pith-number/TL6XJCX7LJWBS4ZCGNVEHGRL6V/events.json","paper":"https://pith.science/paper/TL6XJCX7"},"agent_actions":{"view_html":"https://pith.science/pith/TL6XJCX7LJWBS4ZCGNVEHGRL6V","download_json":"https://pith.science/pith/TL6XJCX7LJWBS4ZCGNVEHGRL6V.json","view_paper":"https://pith.science/paper/TL6XJCX7","resolve_alias":"https://pith.science/api/pith-number/resolve?arxiv=1806.06804&json=true","fetch_graph":"https://pith.science/api/pith-number/TL6XJCX7LJWBS4ZCGNVEHGRL6V/graph.json","fetch_events":"https://pith.science/api/pith-number/TL6XJCX7LJWBS4ZCGNVEHGRL6V/events.json","actions":{"anchor_timestamp":"https://pith.science/pith/TL6XJCX7LJWBS4ZCGNVEHGRL6V/action/timestamp_anchor","attest_storage":"https://pith.science/pith/TL6XJCX7LJWBS4ZCGNVEHGRL6V/action/storage_attestation","attest_author":"https://pith.science/pith/TL6XJCX7LJWBS4ZCGNVEHGRL6V/action/author_attestation","sign_citation":"https://pith.science/pith/TL6XJCX7LJWBS4ZCGNVEHGRL6V/action/citation_signature","submit_replication":"https://pith.science/pith/TL6XJCX7LJWBS4ZCGNVEHGRL6V/action/replication_record"}},"created_at":"2026-05-17T23:58:38.837227+00:00","updated_at":"2026-05-17T23:58:38.837227+00:00"}