{"bundle_type":"pith_open_graph_bundle","bundle_version":"1.0","pith_number":"pith:2022:UB6YHGGAUWIFD2JLSLRAQRHSQ2","short_pith_number":"pith:UB6YHGGA","canonical_record":{"source":{"id":"2204.00300","kind":"arxiv","version":5},"metadata":{"license":"http://creativecommons.org/licenses/by-nc-nd/4.0/","primary_cat":"q-bio.QM","submitted_at":"2022-04-01T09:10:31Z","cross_cats_sorted":[],"title_canon_sha256":"5ffdb29cea5d101ac8e59681ec4013da501b831590d549c2a6922ce8b2c3e2f0","abstract_canon_sha256":"e7635f05ae15b57982d9a499f4b410fd1065ffd325b432992597afc3dbf8f619"},"schema_version":"1.0"},"canonical_sha256":"a07d8398c0a59051e92b92e20844f286bd7c1db45cbeaa7b9b761a35060c9184","source":{"kind":"arxiv","id":"2204.00300","version":5},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2204.00300","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"arxiv_version","alias_value":"2204.00300v5","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2204.00300","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"pith_short_12","alias_value":"UB6YHGGAUWIF","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"pith_short_16","alias_value":"UB6YHGGAUWIFD2JL","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"pith_short_8","alias_value":"UB6YHGGA","created_at":"2026-07-05T04:46:36Z"}],"events":[{"event_type":"record_created","subject_pith_number":"pith:2022:UB6YHGGAUWIFD2JLSLRAQRHSQ2","target":"record","payload":{"canonical_record":{"source":{"id":"2204.00300","kind":"arxiv","version":5},"metadata":{"license":"http://creativecommons.org/licenses/by-nc-nd/4.0/","primary_cat":"q-bio.QM","submitted_at":"2022-04-01T09:10:31Z","cross_cats_sorted":[],"title_canon_sha256":"5ffdb29cea5d101ac8e59681ec4013da501b831590d549c2a6922ce8b2c3e2f0","abstract_canon_sha256":"e7635f05ae15b57982d9a499f4b410fd1065ffd325b432992597afc3dbf8f619"},"schema_version":"1.0"},"canonical_sha256":"a07d8398c0a59051e92b92e20844f286bd7c1db45cbeaa7b9b761a35060c9184","receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-07-05T04:46:36.559307Z","signature_b64":"lWbwlBId7GQKZPvdknoeXmARRjqhLql9bB7aLOp9PhxcUueImIX5EoaUGzaMKYdkKSq0l2h4uVXTvoTnGI6bBQ==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"a07d8398c0a59051e92b92e20844f286bd7c1db45cbeaa7b9b761a35060c9184","last_reissued_at":"2026-07-05T04:46:36.558831Z","signature_status":"signed_v1","first_computed_at":"2026-07-05T04:46:36.558831Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"source_kind":"arxiv","source_id":"2204.00300","source_version":5,"attestation_state":"computed"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-07-05T04:46:36Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"ld9rhQwjbBBlhD5gb5PNEQ9TckDFLJbp9qsnpkWFwPV2lYa0gR1yTNmRb4uoSjBhFO4C0f0uNYNxEgEulUTeBA==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-07-17T10:54:38.224763Z"},"content_sha256":"233b22083f208256f72cafd42af81627f3a375de423069dc2f68c42470d76b5c","schema_version":"1.0","event_id":"sha256:233b22083f208256f72cafd42af81627f3a375de423069dc2f68c42470d76b5c"},{"event_type":"graph_snapshot","subject_pith_number":"pith:2022:UB6YHGGAUWIFD2JLSLRAQRHSQ2","target":"graph","payload":{"graph_snapshot":{"paper":{"title":"Interpretable RNA Foundation Model from Unannotated Data for Highly Accurate RNA Structure and Function Predictions","license":"http://creativecommons.org/licenses/by-nc-nd/4.0/","headline":"","cross_cats":[],"primary_cat":"q-bio.QM","authors_text":"Irwin King, Jiayang Chen, Jin Xiao, Liang Hong, Licheng Zong, Qingxiong Tan, Qinze Yu, Siqi Sun, Tao Shen, Yixuan Wang, Yu Li, Zhihang Hu","submitted_at":"2022-04-01T09:10:31Z","abstract_excerpt":"Non-coding RNA structure and function are essential to understanding various biological processes, such as cell signaling, gene expression, and post-transcriptional regulations. These are all among the core problems in the RNA field. With the rapid growth of sequencing technology, we have accumulated a massive amount of unannotated RNA sequences. On the other hand, expensive experimental observatory results in only limited numbers of annotated data and 3D structures. Hence, it is still challenging to design computational methods for predicting their structures and functions. The lack of annota"},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"2204.00300","kind":"arxiv","version":5},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"integrity":{"clean":true,"summary":{"advisory":0,"critical":0,"by_detector":{},"informational":0},"endpoint":"/pith/2204.00300/integrity.json","findings":[],"available":true,"detectors_run":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938"},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"verdict_id":null},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-07-05T04:46:36Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"DDxlOyqDbKvTpXEN/gaPLcknGVqSo1Lh8tPAKG7+RflvpYdO690DYsIx1kXdTWfc3IlygVoY/r8Hf42GFjKUCQ==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-07-17T10:54:38.225134Z"},"content_sha256":"3cf479926581ef721b5326ed0b1210a560d877f8567a0b4d363d051d72b6d889","schema_version":"1.0","event_id":"sha256:3cf479926581ef721b5326ed0b1210a560d877f8567a0b4d363d051d72b6d889"}],"timestamp_proofs":[],"mirror_hints":[{"mirror_type":"https","name":"Pith Resolver","base_url":"https://pith.science","bundle_url":"https://pith.science/pith/UB6YHGGAUWIFD2JLSLRAQRHSQ2/bundle.json","state_url":"https://pith.science/pith/UB6YHGGAUWIFD2JLSLRAQRHSQ2/state.json","well_known_bundle_url":"https://pith.science/.well-known/pith/UB6YHGGAUWIFD2JLSLRAQRHSQ2/bundle.json","status":"primary"}],"public_keys":[{"key_id":"pith-v1-2026-05","algorithm":"ed25519","format":"raw","public_key_b64":"stVStoiQhXFxp4s2pdzPNoqVNBMojDU/fJ2db5S3CbM=","public_key_hex":"b2d552b68890857171a78b36a5dccf368a953413288c353f7c9d9d6f94b709b3","fingerprint_sha256_b32_first128bits":"RVFV5Z2OI2J3ZUO7ERDEBCYNKS","fingerprint_sha256_hex":"8d4b5ee74e4693bcd1df2446408b0d54","rotates_at":null,"url":"https://pith.science/pith-signing-key.json","notes":"Pith uses this Ed25519 key to sign canonical record SHA-256 digests. Verify with: ed25519_verify(public_key, message=canonical_sha256_bytes, signature=base64decode(signature_b64))."}],"merge_version":"pith-open-graph-merge-v1","built_at":"2026-07-17T10:54:38Z","links":{"resolver":"https://pith.science/pith/UB6YHGGAUWIFD2JLSLRAQRHSQ2","bundle":"https://pith.science/pith/UB6YHGGAUWIFD2JLSLRAQRHSQ2/bundle.json","state":"https://pith.science/pith/UB6YHGGAUWIFD2JLSLRAQRHSQ2/state.json","well_known_bundle":"https://pith.science/.well-known/pith/UB6YHGGAUWIFD2JLSLRAQRHSQ2/bundle.json"},"state":{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2022:UB6YHGGAUWIFD2JLSLRAQRHSQ2","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"e7635f05ae15b57982d9a499f4b410fd1065ffd325b432992597afc3dbf8f619","cross_cats_sorted":[],"license":"http://creativecommons.org/licenses/by-nc-nd/4.0/","primary_cat":"q-bio.QM","submitted_at":"2022-04-01T09:10:31Z","title_canon_sha256":"5ffdb29cea5d101ac8e59681ec4013da501b831590d549c2a6922ce8b2c3e2f0"},"schema_version":"1.0","source":{"id":"2204.00300","kind":"arxiv","version":5}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2204.00300","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"arxiv_version","alias_value":"2204.00300v5","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2204.00300","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"pith_short_12","alias_value":"UB6YHGGAUWIF","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"pith_short_16","alias_value":"UB6YHGGAUWIFD2JL","created_at":"2026-07-05T04:46:36Z"},{"alias_kind":"pith_short_8","alias_value":"UB6YHGGA","created_at":"2026-07-05T04:46:36Z"}],"graph_snapshots":[{"event_id":"sha256:3cf479926581ef721b5326ed0b1210a560d877f8567a0b4d363d051d72b6d889","target":"graph","created_at":"2026-07-05T04:46:36Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"integrity":{"available":true,"clean":true,"detectors_run":[],"endpoint":"/pith/2204.00300/integrity.json","findings":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938","summary":{"advisory":0,"by_detector":{},"critical":0,"informational":0}},"paper":{"abstract_excerpt":"Non-coding RNA structure and function are essential to understanding various biological processes, such as cell signaling, gene expression, and post-transcriptional regulations. These are all among the core problems in the RNA field. With the rapid growth of sequencing technology, we have accumulated a massive amount of unannotated RNA sequences. On the other hand, expensive experimental observatory results in only limited numbers of annotated data and 3D structures. Hence, it is still challenging to design computational methods for predicting their structures and functions. The lack of annota","authors_text":"Irwin King, Jiayang Chen, Jin Xiao, Liang Hong, Licheng Zong, Qingxiong Tan, Qinze Yu, Siqi Sun, Tao Shen, Yixuan Wang, Yu Li, Zhihang Hu","cross_cats":[],"headline":"","license":"http://creativecommons.org/licenses/by-nc-nd/4.0/","primary_cat":"q-bio.QM","submitted_at":"2022-04-01T09:10:31Z","title":"Interpretable RNA Foundation Model from Unannotated Data for Highly Accurate RNA Structure and Function Predictions"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"2204.00300","kind":"arxiv","version":5},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:233b22083f208256f72cafd42af81627f3a375de423069dc2f68c42470d76b5c","target":"record","created_at":"2026-07-05T04:46:36Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"e7635f05ae15b57982d9a499f4b410fd1065ffd325b432992597afc3dbf8f619","cross_cats_sorted":[],"license":"http://creativecommons.org/licenses/by-nc-nd/4.0/","primary_cat":"q-bio.QM","submitted_at":"2022-04-01T09:10:31Z","title_canon_sha256":"5ffdb29cea5d101ac8e59681ec4013da501b831590d549c2a6922ce8b2c3e2f0"},"schema_version":"1.0","source":{"id":"2204.00300","kind":"arxiv","version":5}},"canonical_sha256":"a07d8398c0a59051e92b92e20844f286bd7c1db45cbeaa7b9b761a35060c9184","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"a07d8398c0a59051e92b92e20844f286bd7c1db45cbeaa7b9b761a35060c9184","first_computed_at":"2026-07-05T04:46:36.558831Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-07-05T04:46:36.558831Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"lWbwlBId7GQKZPvdknoeXmARRjqhLql9bB7aLOp9PhxcUueImIX5EoaUGzaMKYdkKSq0l2h4uVXTvoTnGI6bBQ==","signature_status":"signed_v1","signed_at":"2026-07-05T04:46:36.559307Z","signed_message":"canonical_sha256_bytes"},"source_id":"2204.00300","source_kind":"arxiv","source_version":5}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:233b22083f208256f72cafd42af81627f3a375de423069dc2f68c42470d76b5c","sha256:3cf479926581ef721b5326ed0b1210a560d877f8567a0b4d363d051d72b6d889"],"state_sha256":"b3bd476664bc95df64b436a33891358d10e04c62a44cbef00baa00aeb4aa2fdb"},"bundle_signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"064bn+HcoQTvxT9gcBZG3EDNEjzKtqCNG+towsByVbyTJy7uN80ZjYNyU6sH0RCw3GZvV1vFvIJ08Nmq17LyBQ==","signed_message":"bundle_sha256_bytes","signed_at":"2026-07-17T10:54:38.227223Z","bundle_sha256":"74e07260f12d913d1679a5cef37451c7ac98cf2ea9b8dee45e59260501cbf129"}}