{"bundle_type":"pith_open_graph_bundle","bundle_version":"1.0","pith_number":"pith:2023:ZISRBG2BKB5SYOLGDJIICSY3ES","short_pith_number":"pith:ZISRBG2B","canonical_record":{"source":{"id":"2312.00183","kind":"arxiv","version":1},"metadata":{"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.CE","submitted_at":"2023-11-30T20:46:20Z","cross_cats_sorted":["cs.AI"],"title_canon_sha256":"9edc16391aa3f846756c14b52c3e77febcc631cd1885118866cb818122bc3afd","abstract_canon_sha256":"cdfbf104ba02de044b35120940b58e072eb8ee3b22b823cd55b2eeb356c4992d"},"schema_version":"1.0"},"canonical_sha256":"ca25109b41507b2c39661a50814b1b24bb4e9107aad145bb35ca5d73e9f54ef9","source":{"kind":"arxiv","id":"2312.00183","version":1},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2312.00183","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"arxiv_version","alias_value":"2312.00183v1","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2312.00183","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"pith_short_12","alias_value":"ZISRBG2BKB5S","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"pith_short_16","alias_value":"ZISRBG2BKB5SYOLG","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"pith_short_8","alias_value":"ZISRBG2B","created_at":"2026-07-05T11:51:14Z"}],"events":[{"event_type":"record_created","subject_pith_number":"pith:2023:ZISRBG2BKB5SYOLGDJIICSY3ES","target":"record","payload":{"canonical_record":{"source":{"id":"2312.00183","kind":"arxiv","version":1},"metadata":{"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.CE","submitted_at":"2023-11-30T20:46:20Z","cross_cats_sorted":["cs.AI"],"title_canon_sha256":"9edc16391aa3f846756c14b52c3e77febcc631cd1885118866cb818122bc3afd","abstract_canon_sha256":"cdfbf104ba02de044b35120940b58e072eb8ee3b22b823cd55b2eeb356c4992d"},"schema_version":"1.0"},"canonical_sha256":"ca25109b41507b2c39661a50814b1b24bb4e9107aad145bb35ca5d73e9f54ef9","receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-07-05T11:51:14.348216Z","signature_b64":"sW6lIv4uf4VzfzV/ox6MEamykCCuKu+vyYYwA1vHV6d4hq9pqaVHLzji6Clf5Xnv6s2zRPATux+fL/KbFFI/Bg==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"ca25109b41507b2c39661a50814b1b24bb4e9107aad145bb35ca5d73e9f54ef9","last_reissued_at":"2026-07-05T11:51:14.347727Z","signature_status":"signed_v1","first_computed_at":"2026-07-05T11:51:14.347727Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"source_kind":"arxiv","source_id":"2312.00183","source_version":1,"attestation_state":"computed"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-07-05T11:51:14Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"qKJRYoguu+MMu93xT6BsEG6Wy8mGORVMEUwDUVG5E6n6tV2S+Ryl8XKyUFgTi7/4S9qAMSN+ojgtqMgzV9SvDw==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-07-08T20:51:25.813302Z"},"content_sha256":"d844fe237569031f48c98264dd9302c45c4491e1b86b24172b1f163551ef05cb","schema_version":"1.0","event_id":"sha256:d844fe237569031f48c98264dd9302c45c4491e1b86b24172b1f163551ef05cb"},{"event_type":"graph_snapshot","subject_pith_number":"pith:2023:ZISRBG2BKB5SYOLGDJIICSY3ES","target":"graph","payload":{"graph_snapshot":{"paper":{"title":"RNA-KG: An ontology-based knowledge graph for representing interactions involving RNA molecules","license":"http://creativecommons.org/licenses/by/4.0/","headline":"","cross_cats":["cs.AI"],"primary_cat":"cs.CE","authors_text":"Alberto Cabri, Elena Casiraghi, Emanuele Cavalleri, Giorgio Valentini, Jessica Gliozzo, Justin Reese, Marco Mesiti, Mauricio Soto-Gomez, Paolo Perlasca, Peter N Robinson, Sara Bonfitto, Tiffany J. Callahan","submitted_at":"2023-11-30T20:46:20Z","abstract_excerpt":"The \"RNA world\" represents a novel frontier for the study of fundamental biological processes and human diseases and is paving the way for the development of new drugs tailored to the patient's biomolecular characteristics. Although scientific data about coding and non-coding RNA molecules are continuously produced and available from public repositories, they are scattered across different databases and a centralized, uniform, and semantically consistent representation of the \"RNA world\" is still lacking. We propose RNA-KG, a knowledge graph encompassing biological knowledge about RNAs gathere"},"claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"2312.00183","kind":"arxiv","version":1},"verdict":{"id":null,"model_set":{},"created_at":null,"strongest_claim":"","one_line_summary":"","pipeline_version":null,"weakest_assumption":"","pith_extraction_headline":""},"integrity":{"clean":true,"summary":{"advisory":0,"critical":0,"by_detector":{},"informational":0},"endpoint":"/pith/2312.00183/integrity.json","findings":[],"available":true,"detectors_run":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938"},"references":{"count":0,"sample":[],"resolved_work":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","internal_anchors":0},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"verdict_id":null},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-07-05T11:51:14Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"6zPZBIfoxj1mryAkCayV8jedYG/vBFdDgGj4jsq2ZlHqfLBkyFGXo0BJCMqeXv33bp1ZGRILYHqCiAoE34evAg==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-07-08T20:51:25.813702Z"},"content_sha256":"ff9a05c806b6cfe4ecdb242a838aaad845432a2aa5ff5fe2761cbe52eedcd3b4","schema_version":"1.0","event_id":"sha256:ff9a05c806b6cfe4ecdb242a838aaad845432a2aa5ff5fe2761cbe52eedcd3b4"}],"timestamp_proofs":[],"mirror_hints":[{"mirror_type":"https","name":"Pith Resolver","base_url":"https://pith.science","bundle_url":"https://pith.science/pith/ZISRBG2BKB5SYOLGDJIICSY3ES/bundle.json","state_url":"https://pith.science/pith/ZISRBG2BKB5SYOLGDJIICSY3ES/state.json","well_known_bundle_url":"https://pith.science/.well-known/pith/ZISRBG2BKB5SYOLGDJIICSY3ES/bundle.json","status":"primary"}],"public_keys":[{"key_id":"pith-v1-2026-05","algorithm":"ed25519","format":"raw","public_key_b64":"stVStoiQhXFxp4s2pdzPNoqVNBMojDU/fJ2db5S3CbM=","public_key_hex":"b2d552b68890857171a78b36a5dccf368a953413288c353f7c9d9d6f94b709b3","fingerprint_sha256_b32_first128bits":"RVFV5Z2OI2J3ZUO7ERDEBCYNKS","fingerprint_sha256_hex":"8d4b5ee74e4693bcd1df2446408b0d54","rotates_at":null,"url":"https://pith.science/pith-signing-key.json","notes":"Pith uses this Ed25519 key to sign canonical record SHA-256 digests. Verify with: ed25519_verify(public_key, message=canonical_sha256_bytes, signature=base64decode(signature_b64))."}],"merge_version":"pith-open-graph-merge-v1","built_at":"2026-07-08T20:51:25Z","links":{"resolver":"https://pith.science/pith/ZISRBG2BKB5SYOLGDJIICSY3ES","bundle":"https://pith.science/pith/ZISRBG2BKB5SYOLGDJIICSY3ES/bundle.json","state":"https://pith.science/pith/ZISRBG2BKB5SYOLGDJIICSY3ES/state.json","well_known_bundle":"https://pith.science/.well-known/pith/ZISRBG2BKB5SYOLGDJIICSY3ES/bundle.json"},"state":{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2023:ZISRBG2BKB5SYOLGDJIICSY3ES","merge_version":"pith-open-graph-merge-v1","event_count":2,"valid_event_count":2,"invalid_event_count":0,"equivocation_count":0,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"cdfbf104ba02de044b35120940b58e072eb8ee3b22b823cd55b2eeb356c4992d","cross_cats_sorted":["cs.AI"],"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.CE","submitted_at":"2023-11-30T20:46:20Z","title_canon_sha256":"9edc16391aa3f846756c14b52c3e77febcc631cd1885118866cb818122bc3afd"},"schema_version":"1.0","source":{"id":"2312.00183","kind":"arxiv","version":1}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2312.00183","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"arxiv_version","alias_value":"2312.00183v1","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2312.00183","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"pith_short_12","alias_value":"ZISRBG2BKB5S","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"pith_short_16","alias_value":"ZISRBG2BKB5SYOLG","created_at":"2026-07-05T11:51:14Z"},{"alias_kind":"pith_short_8","alias_value":"ZISRBG2B","created_at":"2026-07-05T11:51:14Z"}],"graph_snapshots":[{"event_id":"sha256:ff9a05c806b6cfe4ecdb242a838aaad845432a2aa5ff5fe2761cbe52eedcd3b4","target":"graph","created_at":"2026-07-05T11:51:14Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":0,"items":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"formal_canon":{"evidence_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"integrity":{"available":true,"clean":true,"detectors_run":[],"endpoint":"/pith/2312.00183/integrity.json","findings":[],"snapshot_sha256":"c28c3603d3b5d939e8dc4c7e95fa8dfce3d595e45f758748cecf8e644a296938","summary":{"advisory":0,"by_detector":{},"critical":0,"informational":0}},"paper":{"abstract_excerpt":"The \"RNA world\" represents a novel frontier for the study of fundamental biological processes and human diseases and is paving the way for the development of new drugs tailored to the patient's biomolecular characteristics. Although scientific data about coding and non-coding RNA molecules are continuously produced and available from public repositories, they are scattered across different databases and a centralized, uniform, and semantically consistent representation of the \"RNA world\" is still lacking. We propose RNA-KG, a knowledge graph encompassing biological knowledge about RNAs gathere","authors_text":"Alberto Cabri, Elena Casiraghi, Emanuele Cavalleri, Giorgio Valentini, Jessica Gliozzo, Justin Reese, Marco Mesiti, Mauricio Soto-Gomez, Paolo Perlasca, Peter N Robinson, Sara Bonfitto, Tiffany J. Callahan","cross_cats":["cs.AI"],"headline":"","license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.CE","submitted_at":"2023-11-30T20:46:20Z","title":"RNA-KG: An ontology-based knowledge graph for representing interactions involving RNA molecules"},"references":{"count":0,"internal_anchors":0,"resolved_work":0,"sample":[],"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"source":{"id":"2312.00183","kind":"arxiv","version":1},"verdict":{"created_at":null,"id":null,"model_set":{},"one_line_summary":"","pipeline_version":null,"pith_extraction_headline":"","strongest_claim":"","weakest_assumption":""}},"verdict_id":null}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:d844fe237569031f48c98264dd9302c45c4491e1b86b24172b1f163551ef05cb","target":"record","created_at":"2026-07-05T11:51:14Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"cdfbf104ba02de044b35120940b58e072eb8ee3b22b823cd55b2eeb356c4992d","cross_cats_sorted":["cs.AI"],"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.CE","submitted_at":"2023-11-30T20:46:20Z","title_canon_sha256":"9edc16391aa3f846756c14b52c3e77febcc631cd1885118866cb818122bc3afd"},"schema_version":"1.0","source":{"id":"2312.00183","kind":"arxiv","version":1}},"canonical_sha256":"ca25109b41507b2c39661a50814b1b24bb4e9107aad145bb35ca5d73e9f54ef9","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"ca25109b41507b2c39661a50814b1b24bb4e9107aad145bb35ca5d73e9f54ef9","first_computed_at":"2026-07-05T11:51:14.347727Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-07-05T11:51:14.347727Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"sW6lIv4uf4VzfzV/ox6MEamykCCuKu+vyYYwA1vHV6d4hq9pqaVHLzji6Clf5Xnv6s2zRPATux+fL/KbFFI/Bg==","signature_status":"signed_v1","signed_at":"2026-07-05T11:51:14.348216Z","signed_message":"canonical_sha256_bytes"},"source_id":"2312.00183","source_kind":"arxiv","source_version":1}}},"equivocations":[],"invalid_events":[],"applied_event_ids":["sha256:d844fe237569031f48c98264dd9302c45c4491e1b86b24172b1f163551ef05cb","sha256:ff9a05c806b6cfe4ecdb242a838aaad845432a2aa5ff5fe2761cbe52eedcd3b4"],"state_sha256":"be4d895dc2fe263763bc3cb21d9e739cc4df7cb8f0c561e7b0436b6008dce50f"},"bundle_signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"559ATnTQMpFT0nAH7NTmbcRatQ/re9L4p5b6JHbzs1oZfSif6pcAY4ZlclEzVZRBRlOOcqMomIbvaYzHvKsgAg==","signed_message":"bundle_sha256_bytes","signed_at":"2026-07-08T20:51:25.815768Z","bundle_sha256":"d0bda5c89ce8c5b4ac1ad54cbc1b657ad1f70600e829c12c77c94fcaefcd0c93"}}