{"bundle_type":"pith_open_graph_bundle","bundle_version":"1.0","pith_number":"pith:2026:ZWQ5F4RXBT6WABWBFBGWFENJUI","short_pith_number":"pith:ZWQ5F4RX","canonical_record":{"source":{"id":"2605.17675","kind":"arxiv","version":1},"metadata":{"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.SE","submitted_at":"2026-05-17T22:08:52Z","cross_cats_sorted":["cond-mat.mtrl-sci"],"title_canon_sha256":"d141a1ce2230203c86e83d9a8f9955e422afc68f20c24bb60ba7de7202db9444","abstract_canon_sha256":"017559586324baa7af67206cde0b2258a35175b040c5cca3f168bfb1acbdab3f"},"schema_version":"1.0"},"canonical_sha256":"cda1d2f2370cfd6006c1284d6291a9a23fc86d0397d2126f98a66e77ffff7baf","source":{"kind":"arxiv","id":"2605.17675","version":1},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2605.17675","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"arxiv_version","alias_value":"2605.17675v1","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2605.17675","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"pith_short_12","alias_value":"ZWQ5F4RXBT6W","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"pith_short_16","alias_value":"ZWQ5F4RXBT6WABWB","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"pith_short_8","alias_value":"ZWQ5F4RX","created_at":"2026-05-20T00:04:52Z"}],"events":[{"event_type":"record_created","subject_pith_number":"pith:2026:ZWQ5F4RXBT6WABWBFBGWFENJUI","target":"record","payload":{"canonical_record":{"source":{"id":"2605.17675","kind":"arxiv","version":1},"metadata":{"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.SE","submitted_at":"2026-05-17T22:08:52Z","cross_cats_sorted":["cond-mat.mtrl-sci"],"title_canon_sha256":"d141a1ce2230203c86e83d9a8f9955e422afc68f20c24bb60ba7de7202db9444","abstract_canon_sha256":"017559586324baa7af67206cde0b2258a35175b040c5cca3f168bfb1acbdab3f"},"schema_version":"1.0"},"canonical_sha256":"cda1d2f2370cfd6006c1284d6291a9a23fc86d0397d2126f98a66e77ffff7baf","receipt":{"kind":"pith_receipt","key_id":"pith-v1-2026-05","algorithm":"ed25519","signed_at":"2026-05-20T00:04:52.149966Z","signature_b64":"KCYMNNXcRtKat/5Tph2ofzw4NVU4N+tGMxC3ZGFUGg4dl0moJM80NqFBScTqNnH4TdjUJVTcoSp75qwFmSfyAg==","signed_message":"canonical_sha256_bytes","builder_version":"pith-number-builder-2026-05-17-v1","receipt_version":"0.3","canonical_sha256":"cda1d2f2370cfd6006c1284d6291a9a23fc86d0397d2126f98a66e77ffff7baf","last_reissued_at":"2026-05-20T00:04:52.149030Z","signature_status":"signed_v1","first_computed_at":"2026-05-20T00:04:52.149030Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"source_kind":"arxiv","source_id":"2605.17675","source_version":1,"attestation_state":"computed"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-05-20T00:04:52Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"tbGZjaG0Hr6kvYbtaYygKY9psxTqJGG/WkmSuW1f0aPGOtfUeaWDS86R/jxqgWCi5TscPXubaWV0g2I8gGWDBg==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-05-22T04:05:09.902647Z"},"content_sha256":"8632e1d52d9e2743c1b01e92ac60289e769c1944e07c7b201145d6dda32f2633","schema_version":"1.0","event_id":"sha256:8632e1d52d9e2743c1b01e92ac60289e769c1944e07c7b201145d6dda32f2633"},{"event_type":"graph_snapshot","subject_pith_number":"pith:2026:ZWQ5F4RXBT6WABWBFBGWFENJUI","target":"graph","payload":{"graph_snapshot":{"paper":{"title":"Bridging the Gap on AI-Assisted Scientific Software Development Through Transparency and Traceability","license":"http://creativecommons.org/licenses/by/4.0/","headline":"A structured framework allows AI-assisted verification and validation in scientific software to meet NQA-1 standards while preserving human accountability.","cross_cats":["cond-mat.mtrl-sci"],"primary_cat":"cs.SE","authors_text":"Casey Icenhour, Chaitanya Bhave, Cody J. Permann, Daniel Schwen, Lin Yang, Pierre-Cl\\'ement A. Simon","submitted_at":"2026-05-17T22:08:52Z","abstract_excerpt":"The widespread adoption of AI-assisted development in scientific software is not a future concern -- it is a present reality. Researchers are already using large language models to write code, generate test cases, and draft documentation, yet this practice remains largely unacknowledged and unguided in formal workflows and published work. This ad hoc, ungoverned use of AI represents a systemic risk to scientific software quality, particularly in safety-relevant modeling and simulation tools subject to strict Software Quality Assurance (SQA), or even Nuclear Quality Assurance Level 1 (NQA-1) st"},"claims":{"count":4,"items":[{"kind":"strongest_claim","text":"The proposed guidance, developed based on practical experience described herein, operates within NQA-1 requirements, preserves human accountability, and establishes the disclosure and review standards that responsible AI-assisted scientific software development demands.","source":"verdict.strongest_claim","status":"machine_extracted","claim_id":"C1","attestation":"unclaimed"},{"kind":"weakest_assumption","text":"That the structured framework developed from TMAP8 V&V experience can be generalized and implemented across other scientific software projects subject to strict SQA without introducing new compliance gaps.","source":"verdict.weakest_assumption","status":"machine_extracted","claim_id":"C2","attestation":"unclaimed"},{"kind":"one_line_summary","text":"Proposes guidance for responsible AI use in scientific software development under NQA-1 standards, illustrated with TMAP8 V&V cases to ensure accountability and auditability.","source":"verdict.one_line_summary","status":"machine_extracted","claim_id":"C3","attestation":"unclaimed"},{"kind":"headline","text":"A structured framework allows AI-assisted verification and validation in scientific software to meet NQA-1 standards while preserving human accountability.","source":"verdict.pith_extraction.headline","status":"machine_extracted","claim_id":"C4","attestation":"unclaimed"}],"snapshot_sha256":"03aefde8230b1af1884b90cd496b0e2872a01873d57b919fe9376b346c418a2d"},"source":{"id":"2605.17675","kind":"arxiv","version":1},"verdict":{"id":"4c821265-97ee-4b18-8be8-0779b114fa6b","model_set":{"reader":"grok-4.3"},"created_at":"2026-05-19T22:03:53.877335Z","strongest_claim":"The proposed guidance, developed based on practical experience described herein, operates within NQA-1 requirements, preserves human accountability, and establishes the disclosure and review standards that responsible AI-assisted scientific software development demands.","one_line_summary":"Proposes guidance for responsible AI use in scientific software development under NQA-1 standards, illustrated with TMAP8 V&V cases to ensure accountability and auditability.","pipeline_version":"pith-pipeline@v0.9.0","weakest_assumption":"That the structured framework developed from TMAP8 V&V experience can be generalized and implemented across other scientific software projects subject to strict SQA without introducing new compliance gaps.","pith_extraction_headline":"A structured framework allows AI-assisted verification and validation in scientific software to meet NQA-1 standards while preserving human accountability."},"integrity":{"clean":false,"summary":{"advisory":1,"critical":2,"by_detector":{"doi_compliance":{"total":3,"advisory":1,"critical":2,"informational":0}},"informational":0},"endpoint":"/pith/2605.17675/integrity.json","findings":[{"note":"DOI '10.17226/25991' as printed in the bibliography is syntactically invalid and cannot resolve.","detector":"doi_compliance","severity":"critical","ref_index":30,"audited_at":"2026-05-19T22:11:44.936256Z","detected_doi":"10.17226/25991","finding_type":"broken_identifier","verdict_class":"incontrovertible","detected_arxiv_id":null},{"note":"DOI in the printed bibliography is fragmented by whitespace or line breaks. A longer candidate (10.1016/j.nme.2022.23101137) was visible in the surrounding text but could not be confirmed against doi.org as printed.","detector":"doi_compliance","severity":"advisory","ref_index":46,"audited_at":"2026-05-19T22:11:44.936256Z","detected_doi":"10.1016/j.nme.2022.23101137","finding_type":"recoverable_identifier","verdict_class":"incontrovertible","detected_arxiv_id":null},{"note":"Identifier '10.1109/ieeestd.2017.7916712' is syntactically valid but the DOI registry (doi.org) returned 404, and Crossref / OpenAlex / internal corpus also have no record. The cited work could not be located through any authoritative source.","detector":"doi_compliance","severity":"critical","ref_index":22,"audited_at":"2026-05-19T22:11:44.936256Z","detected_doi":"10.1109/ieeestd.2017.7916712","finding_type":"unresolvable_identifier","verdict_class":"cross_source","detected_arxiv_id":null}],"available":true,"detectors_run":[{"name":"doi_title_agreement","ran_at":"2026-05-19T22:31:19.455458Z","status":"completed","version":"1.0.0","findings_count":0},{"name":"doi_compliance","ran_at":"2026-05-19T22:11:44.936256Z","status":"completed","version":"1.0.0","findings_count":3},{"name":"cited_work_retraction","ran_at":"2026-05-19T21:51:59.283946Z","status":"completed","version":"1.0.0","findings_count":0},{"name":"citation_quote_validity","ran_at":"2026-05-19T21:49:44.260360Z","status":"skipped","version":"0.1.0","findings_count":0},{"name":"ai_meta_artifact","ran_at":"2026-05-19T21:33:23.531823Z","status":"skipped","version":"1.0.0","findings_count":0},{"name":"claim_evidence","ran_at":"2026-05-19T21:21:57.445302Z","status":"completed","version":"1.0.0","findings_count":0}],"snapshot_sha256":"31efa1e326c5628b9e58c513b76d6d692aba626278066605ed48892c715e850b"},"references":{"count":60,"sample":[{"doi":"","year":2025,"title":"Roumeliotis, and Manoj Karkee","work_id":"08c219fa-416b-4ec1-bfc1-39e8436a4d8c","ref_index":1,"cited_arxiv_id":"","is_internal_anchor":false},{"doi":"","year":2026,"title":"Agentic Much? Adoption of Coding Agents on GitHub","work_id":"be992ab1-17d1-4453-aef3-fbd3ae10f30b","ref_index":2,"cited_arxiv_id":"2601.18341","is_internal_anchor":true},{"doi":"","year":2024,"title":"The Landscape of Emerging AI Agent Architectures for Reasoning, Planning, and Tool Calling: A Survey","work_id":"d41cecd0-887c-48d8-a3b1-bdd1b68c7053","ref_index":3,"cited_arxiv_id":"2404.11584","is_internal_anchor":true},{"doi":"","year":null,"title":"https://anthropic.com/research/ measuring-agent-autonomy 19","work_id":"543f7d22-12b5-4447-ace9-a5c2fb793bc9","ref_index":4,"cited_arxiv_id":"","is_internal_anchor":false},{"doi":"","year":2026,"title":"Nature Machine Intelligence8(2), 136–137 (2026) https://doi.org/10.1038/ s42256-026-01178-z","work_id":"f22c2e93-604f-4754-9883-9b316704d575","ref_index":5,"cited_arxiv_id":"","is_internal_anchor":false}],"resolved_work":60,"snapshot_sha256":"cf88dc87360f47a5006d5f2b10bd02393bcbd9b909f84ad2698b9bd2e6ce3b69","internal_anchors":3},"formal_canon":{"evidence_count":2,"snapshot_sha256":"9b944d978740ebc9a0d14ffa7b37e97cf13e9dcadaa4c50770c0c9af2f797cc9"},"author_claims":{"count":0,"strong_count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57"},"builder_version":"pith-number-builder-2026-05-17-v1"},"verdict_id":"4c821265-97ee-4b18-8be8-0779b114fa6b"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-05-20T00:04:52Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"3KzaASMVNml3L8HTdWYXiUfZIXoXUAH2N5ZLCa6zAbGH5JYdMkqc7/rcg/x1dkO2KjN/x4azptpspGVWqCJsCQ==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-05-22T04:05:09.903512Z"},"content_sha256":"7cbf5b007cbaa47a4319dffd61a2dc418dbb60ac0fdf9ec9084311eab17b7066","schema_version":"1.0","event_id":"sha256:7cbf5b007cbaa47a4319dffd61a2dc418dbb60ac0fdf9ec9084311eab17b7066"},{"event_type":"integrity_finding","subject_pith_number":"pith:2026:ZWQ5F4RXBT6WABWBFBGWFENJUI","target":"integrity","payload":{"note":"DOI in the printed bibliography is fragmented by whitespace or line breaks. A longer candidate (10.1016/j.nme.2022.23101137) was visible in the surrounding text but could not be confirmed against doi.org as printed.","snippet":"Kremer, K., Brucker, M., Jacob, W., Schwarz-Selinger, T.: Influence of thin sur- face oxide films on hydrogen isotope release from ion-irradiated tungsten. Nuclear Materials and Energy30, 101137 (2022) https://doi.org/10.1016/j.nme.2022. 23","arxiv_id":"2605.17675","detector":"doi_compliance","evidence":{"ref_index":46,"verdict_class":"incontrovertible","resolved_title":null,"printed_excerpt":"Kremer, K., Brucker, M., Jacob, W., Schwarz-Selinger, T.: Influence of thin sur- face oxide films on hydrogen isotope release from ion-irradiated tungsten. Nuclear Materials and Energy30, 101137 (2022) https://doi.org/10.1016/j.nme.2022. 23","reconstructed_doi":"10.1016/j.nme.2022.23101137"},"severity":"advisory","ref_index":46,"audited_at":"2026-05-19T22:11:44.936256Z","event_type":"pith.integrity.v1","detected_doi":"10.1016/j.nme.2022.23101137","detector_url":"https://pith.science/pith-integrity-protocol#doi_compliance","external_url":null,"finding_type":"recoverable_identifier","evidence_hash":"da6b0838f953e2bead74ef80d8b62cffe1e847ef23a59a6d23d7e8f0e19c499b","paper_version":1,"verdict_class":"incontrovertible","resolved_title":null,"detector_version":"1.0.0","detected_arxiv_id":null,"integrity_event_id":3305,"payload_sha256":"a037569c2b7708ac3915c462e967b98632dd7df576e535a96ded5248666c2c43","signature_b64":"z7piSzsktdBwt1wap9a+trFePy5l35JtS981pzOkFNZg84avtKbpwXmqVH4LYDx8OX/LF93ijtb/iI/jOfNDDQ==","signing_key_id":"pith-v1-2026-05"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-05-19T22:12:24Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"qUFeXArVFa9y1HtL0tg6jhXg8JZZN+Mx+HR9rjZ1AkbDc3Cvqxu2oWMSdR9EAAcECDrja/6SFaKEC8YN1tWxDg==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-05-22T04:05:09.904920Z"},"content_sha256":"cb8966ac3a0022d9328c6497bb4a4beee80675efbd3802001d444d760cfbb412","schema_version":"1.0","event_id":"sha256:cb8966ac3a0022d9328c6497bb4a4beee80675efbd3802001d444d760cfbb412"},{"event_type":"integrity_finding","subject_pith_number":"pith:2026:ZWQ5F4RXBT6WABWBFBGWFENJUI","target":"integrity","payload":{"note":"DOI '10.17226/25991' as printed in the bibliography is syntactically invalid and cannot resolve.","snippet":"National Academies of Sciences, Engineering, and Medicine: Bringing Fusion to the U.S. Grid. The National Academies Press, Washington, DC (2021). https: //doi.org/10.17226/25991","arxiv_id":"2605.17675","detector":"doi_compliance","evidence":{"ref_index":30,"raw_excerpt":"National Academies of Sciences, Engineering, and Medicine: Bringing Fusion to the U.S. Grid. The National Academies Press, Washington, DC (2021). https: //doi.org/10.17226/25991","verdict_class":"incontrovertible","doi_as_printed":"10.17226/25991"},"severity":"critical","ref_index":30,"audited_at":"2026-05-19T22:11:44.936256Z","event_type":"pith.integrity.v1","detected_doi":"10.17226/25991","detector_url":"https://pith.science/pith-integrity-protocol#doi_compliance","external_url":null,"finding_type":"broken_identifier","evidence_hash":"2085eca061b4ad3072debd730f1efd5fd00cfa8bb07fbbf40f3f6b57231ddda9","paper_version":1,"verdict_class":"incontrovertible","resolved_title":null,"detector_version":"1.0.0","detected_arxiv_id":null,"integrity_event_id":3304,"payload_sha256":"822eb123c0ea4656a611e902eb6e92bf9d5bdf0789fa5370eb90346f542eb4d0","signature_b64":"EHcFP7QPu7vnLIuzwB+KrGTm//6ZlDebY0pjS0RsLK/q83gLLEd8P3tC5anj+LpmrEdPYfccGIME/aIQCW85Bw==","signing_key_id":"pith-v1-2026-05"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-05-19T22:12:24Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"mEi6dk/3AC4V6TvBLrzNfNyPjMp5xBafrx3biJg+O7Rl/AYpORQO/paGZkIWO8+o0X6Zly5Vvypzn6MABidKAQ==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-05-22T04:05:09.905481Z"},"content_sha256":"6feb74f05a4664daed8b50db1ea59324b8945b6ba849ba7d8e2d8ef63b3bf5e7","schema_version":"1.0","event_id":"sha256:6feb74f05a4664daed8b50db1ea59324b8945b6ba849ba7d8e2d8ef63b3bf5e7"},{"event_type":"integrity_finding","subject_pith_number":"pith:2026:ZWQ5F4RXBT6WABWBFBGWFENJUI","target":"integrity","payload":{"note":"Identifier '10.1109/ieeestd.2017.7916712' is syntactically valid but the DOI registry (doi.org) returned 404, and Crossref / OpenAlex / internal corpus also have no record. The cited work could not be located through any authoritative source.","snippet":"IEEE Standard for System, Software, and Hardware Verification and Validation. https://doi.org/10.1109/IEEESTD.2017.7916712 . IEEE. Revision of IEEE Std 1012-2012","arxiv_id":"2605.17675","detector":"doi_compliance","evidence":{"doi":"10.1109/ieeestd.2017.7916712","arxiv_id":null,"ref_index":22,"raw_excerpt":"IEEE Standard for System, Software, and Hardware Verification and Validation. https://doi.org/10.1109/IEEESTD.2017.7916712 . IEEE. Revision of IEEE Std 1012-2012","verdict_class":"cross_source","checked_sources":["crossref_by_doi","openalex_by_doi","doi_org_head"]},"severity":"critical","ref_index":22,"audited_at":"2026-05-19T22:11:44.936256Z","event_type":"pith.integrity.v1","detected_doi":"10.1109/ieeestd.2017.7916712","detector_url":"https://pith.science/pith-integrity-protocol#doi_compliance","external_url":null,"finding_type":"unresolvable_identifier","evidence_hash":"1907b2864b766675baa852fce5b26c415ba88323fc48eef9daa82a63182350cb","paper_version":1,"verdict_class":"cross_source","resolved_title":null,"detector_version":"1.0.0","detected_arxiv_id":null,"integrity_event_id":3303,"payload_sha256":"3f0f822c46556aa14a861e5d9314f3147708a57322859339df015441aac2c7f0","signature_b64":"PFTjH1UGx80kN4Ec1yi1a+suRp6Ef0DmqNP9rSPzhLLnQiLYVlgv4MfgVU0ylNKUon9hTiMDCMRt+5Prv3HMBA==","signing_key_id":"pith-v1-2026-05"},"signer":{"signer_id":"pith.science","signer_type":"pith_registry","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54"},"created_at":"2026-05-19T22:12:24Z","supersedes":[],"prev_event":null,"signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"u9batwkaERFnYcFLNvKicpW0ptkC+r4c4c0Bt7cj7Ldyx02CZJSWN6NfvXkUEV6mMKHcM7FwoQA3PhOHRiJgCg==","signed_message":"open_graph_event_sha256_bytes","signed_at":"2026-05-22T04:05:09.906029Z"},"content_sha256":"70158718da4a644e2c41a43f6515814c9dfcf3997cb35e757ee8a630c1e04b86","schema_version":"1.0","event_id":"sha256:70158718da4a644e2c41a43f6515814c9dfcf3997cb35e757ee8a630c1e04b86"}],"timestamp_proofs":[],"mirror_hints":[{"mirror_type":"https","name":"Pith Resolver","base_url":"https://pith.science","bundle_url":"https://pith.science/pith/ZWQ5F4RXBT6WABWBFBGWFENJUI/bundle.json","state_url":"https://pith.science/pith/ZWQ5F4RXBT6WABWBFBGWFENJUI/state.json","well_known_bundle_url":"https://pith.science/.well-known/pith/ZWQ5F4RXBT6WABWBFBGWFENJUI/bundle.json","status":"primary"}],"public_keys":[{"key_id":"pith-v1-2026-05","algorithm":"ed25519","format":"raw","public_key_b64":"stVStoiQhXFxp4s2pdzPNoqVNBMojDU/fJ2db5S3CbM=","public_key_hex":"b2d552b68890857171a78b36a5dccf368a953413288c353f7c9d9d6f94b709b3","fingerprint_sha256_b32_first128bits":"RVFV5Z2OI2J3ZUO7ERDEBCYNKS","fingerprint_sha256_hex":"8d4b5ee74e4693bcd1df2446408b0d54","rotates_at":null,"url":"https://pith.science/pith-signing-key.json","notes":"Pith uses this Ed25519 key to sign canonical record SHA-256 digests. Verify with: ed25519_verify(public_key, message=canonical_sha256_bytes, signature=base64decode(signature_b64))."}],"merge_version":"pith-open-graph-merge-v1","built_at":"2026-05-22T04:05:09Z","links":{"resolver":"https://pith.science/pith/ZWQ5F4RXBT6WABWBFBGWFENJUI","bundle":"https://pith.science/pith/ZWQ5F4RXBT6WABWBFBGWFENJUI/bundle.json","state":"https://pith.science/pith/ZWQ5F4RXBT6WABWBFBGWFENJUI/state.json","well_known_bundle":"https://pith.science/.well-known/pith/ZWQ5F4RXBT6WABWBFBGWFENJUI/bundle.json"},"state":{"state_type":"pith_open_graph_state","state_version":"1.0","pith_number":"pith:2026:ZWQ5F4RXBT6WABWBFBGWFENJUI","merge_version":"pith-open-graph-merge-v1","event_count":5,"valid_event_count":5,"invalid_event_count":0,"equivocation_count":1,"current":{"canonical_record":{"metadata":{"abstract_canon_sha256":"017559586324baa7af67206cde0b2258a35175b040c5cca3f168bfb1acbdab3f","cross_cats_sorted":["cond-mat.mtrl-sci"],"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.SE","submitted_at":"2026-05-17T22:08:52Z","title_canon_sha256":"d141a1ce2230203c86e83d9a8f9955e422afc68f20c24bb60ba7de7202db9444"},"schema_version":"1.0","source":{"id":"2605.17675","kind":"arxiv","version":1}},"source_aliases":[{"alias_kind":"arxiv","alias_value":"2605.17675","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"arxiv_version","alias_value":"2605.17675v1","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"doi","alias_value":"10.48550/arxiv.2605.17675","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"pith_short_12","alias_value":"ZWQ5F4RXBT6W","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"pith_short_16","alias_value":"ZWQ5F4RXBT6WABWB","created_at":"2026-05-20T00:04:52Z"},{"alias_kind":"pith_short_8","alias_value":"ZWQ5F4RX","created_at":"2026-05-20T00:04:52Z"}],"graph_snapshots":[{"event_id":"sha256:7cbf5b007cbaa47a4319dffd61a2dc418dbb60ac0fdf9ec9084311eab17b7066","target":"graph","created_at":"2026-05-20T00:04:52Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"graph_snapshot":{"author_claims":{"count":0,"snapshot_sha256":"258153158e38e3291e3d48162225fcdb2d5a3ed65a07baac614ab91432fd4f57","strong_count":0},"builder_version":"pith-number-builder-2026-05-17-v1","claims":{"count":4,"items":[{"attestation":"unclaimed","claim_id":"C1","kind":"strongest_claim","source":"verdict.strongest_claim","status":"machine_extracted","text":"The proposed guidance, developed based on practical experience described herein, operates within NQA-1 requirements, preserves human accountability, and establishes the disclosure and review standards that responsible AI-assisted scientific software development demands."},{"attestation":"unclaimed","claim_id":"C2","kind":"weakest_assumption","source":"verdict.weakest_assumption","status":"machine_extracted","text":"That the structured framework developed from TMAP8 V&V experience can be generalized and implemented across other scientific software projects subject to strict SQA without introducing new compliance gaps."},{"attestation":"unclaimed","claim_id":"C3","kind":"one_line_summary","source":"verdict.one_line_summary","status":"machine_extracted","text":"Proposes guidance for responsible AI use in scientific software development under NQA-1 standards, illustrated with TMAP8 V&V cases to ensure accountability and auditability."},{"attestation":"unclaimed","claim_id":"C4","kind":"headline","source":"verdict.pith_extraction.headline","status":"machine_extracted","text":"A structured framework allows AI-assisted verification and validation in scientific software to meet NQA-1 standards while preserving human accountability."}],"snapshot_sha256":"03aefde8230b1af1884b90cd496b0e2872a01873d57b919fe9376b346c418a2d"},"formal_canon":{"evidence_count":2,"snapshot_sha256":"9b944d978740ebc9a0d14ffa7b37e97cf13e9dcadaa4c50770c0c9af2f797cc9"},"integrity":{"available":true,"clean":false,"detectors_run":[{"findings_count":0,"name":"doi_title_agreement","ran_at":"2026-05-19T22:31:19.455458Z","status":"completed","version":"1.0.0"},{"findings_count":3,"name":"doi_compliance","ran_at":"2026-05-19T22:11:44.936256Z","status":"completed","version":"1.0.0"},{"findings_count":0,"name":"cited_work_retraction","ran_at":"2026-05-19T21:51:59.283946Z","status":"completed","version":"1.0.0"},{"findings_count":0,"name":"citation_quote_validity","ran_at":"2026-05-19T21:49:44.260360Z","status":"skipped","version":"0.1.0"},{"findings_count":0,"name":"ai_meta_artifact","ran_at":"2026-05-19T21:33:23.531823Z","status":"skipped","version":"1.0.0"},{"findings_count":0,"name":"claim_evidence","ran_at":"2026-05-19T21:21:57.445302Z","status":"completed","version":"1.0.0"}],"endpoint":"/pith/2605.17675/integrity.json","findings":[{"audited_at":"2026-05-19T22:11:44.936256Z","detected_arxiv_id":null,"detected_doi":"10.17226/25991","detector":"doi_compliance","finding_type":"broken_identifier","note":"DOI '10.17226/25991' as printed in the bibliography is syntactically invalid and cannot resolve.","ref_index":30,"severity":"critical","verdict_class":"incontrovertible"},{"audited_at":"2026-05-19T22:11:44.936256Z","detected_arxiv_id":null,"detected_doi":"10.1016/j.nme.2022.23101137","detector":"doi_compliance","finding_type":"recoverable_identifier","note":"DOI in the printed bibliography is fragmented by whitespace or line breaks. A longer candidate (10.1016/j.nme.2022.23101137) was visible in the surrounding text but could not be confirmed against doi.org as printed.","ref_index":46,"severity":"advisory","verdict_class":"incontrovertible"},{"audited_at":"2026-05-19T22:11:44.936256Z","detected_arxiv_id":null,"detected_doi":"10.1109/ieeestd.2017.7916712","detector":"doi_compliance","finding_type":"unresolvable_identifier","note":"Identifier '10.1109/ieeestd.2017.7916712' is syntactically valid but the DOI registry (doi.org) returned 404, and Crossref / OpenAlex / internal corpus also have no record. The cited work could not be located through any authoritative source.","ref_index":22,"severity":"critical","verdict_class":"cross_source"}],"snapshot_sha256":"31efa1e326c5628b9e58c513b76d6d692aba626278066605ed48892c715e850b","summary":{"advisory":1,"by_detector":{"doi_compliance":{"advisory":1,"critical":2,"informational":0,"total":3}},"critical":2,"informational":0}},"paper":{"abstract_excerpt":"The widespread adoption of AI-assisted development in scientific software is not a future concern -- it is a present reality. Researchers are already using large language models to write code, generate test cases, and draft documentation, yet this practice remains largely unacknowledged and unguided in formal workflows and published work. This ad hoc, ungoverned use of AI represents a systemic risk to scientific software quality, particularly in safety-relevant modeling and simulation tools subject to strict Software Quality Assurance (SQA), or even Nuclear Quality Assurance Level 1 (NQA-1) st","authors_text":"Casey Icenhour, Chaitanya Bhave, Cody J. Permann, Daniel Schwen, Lin Yang, Pierre-Cl\\'ement A. Simon","cross_cats":["cond-mat.mtrl-sci"],"headline":"A structured framework allows AI-assisted verification and validation in scientific software to meet NQA-1 standards while preserving human accountability.","license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.SE","submitted_at":"2026-05-17T22:08:52Z","title":"Bridging the Gap on AI-Assisted Scientific Software Development Through Transparency and Traceability"},"references":{"count":60,"internal_anchors":3,"resolved_work":60,"sample":[{"cited_arxiv_id":"","doi":"","is_internal_anchor":false,"ref_index":1,"title":"Roumeliotis, and Manoj Karkee","work_id":"08c219fa-416b-4ec1-bfc1-39e8436a4d8c","year":2025},{"cited_arxiv_id":"2601.18341","doi":"","is_internal_anchor":true,"ref_index":2,"title":"Agentic Much? Adoption of Coding Agents on GitHub","work_id":"be992ab1-17d1-4453-aef3-fbd3ae10f30b","year":2026},{"cited_arxiv_id":"2404.11584","doi":"","is_internal_anchor":true,"ref_index":3,"title":"The Landscape of Emerging AI Agent Architectures for Reasoning, Planning, and Tool Calling: A Survey","work_id":"d41cecd0-887c-48d8-a3b1-bdd1b68c7053","year":2024},{"cited_arxiv_id":"","doi":"","is_internal_anchor":false,"ref_index":4,"title":"https://anthropic.com/research/ measuring-agent-autonomy 19","work_id":"543f7d22-12b5-4447-ace9-a5c2fb793bc9","year":null},{"cited_arxiv_id":"","doi":"","is_internal_anchor":false,"ref_index":5,"title":"Nature Machine Intelligence8(2), 136–137 (2026) https://doi.org/10.1038/ s42256-026-01178-z","work_id":"f22c2e93-604f-4754-9883-9b316704d575","year":2026}],"snapshot_sha256":"cf88dc87360f47a5006d5f2b10bd02393bcbd9b909f84ad2698b9bd2e6ce3b69"},"source":{"id":"2605.17675","kind":"arxiv","version":1},"verdict":{"created_at":"2026-05-19T22:03:53.877335Z","id":"4c821265-97ee-4b18-8be8-0779b114fa6b","model_set":{"reader":"grok-4.3"},"one_line_summary":"Proposes guidance for responsible AI use in scientific software development under NQA-1 standards, illustrated with TMAP8 V&V cases to ensure accountability and auditability.","pipeline_version":"pith-pipeline@v0.9.0","pith_extraction_headline":"A structured framework allows AI-assisted verification and validation in scientific software to meet NQA-1 standards while preserving human accountability.","strongest_claim":"The proposed guidance, developed based on practical experience described herein, operates within NQA-1 requirements, preserves human accountability, and establishes the disclosure and review standards that responsible AI-assisted scientific software development demands.","weakest_assumption":"That the structured framework developed from TMAP8 V&V experience can be generalized and implemented across other scientific software projects subject to strict SQA without introducing new compliance gaps."}},"verdict_id":"4c821265-97ee-4b18-8be8-0779b114fa6b"}}],"author_attestations":[],"timestamp_anchors":[],"storage_attestations":[],"citation_signatures":[],"replication_records":[],"corrections":[],"mirror_hints":[],"record_created":{"event_id":"sha256:8632e1d52d9e2743c1b01e92ac60289e769c1944e07c7b201145d6dda32f2633","target":"record","created_at":"2026-05-20T00:04:52Z","signer":{"key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signer_id":"pith.science","signer_type":"pith_registry"},"payload":{"attestation_state":"computed","canonical_record":{"metadata":{"abstract_canon_sha256":"017559586324baa7af67206cde0b2258a35175b040c5cca3f168bfb1acbdab3f","cross_cats_sorted":["cond-mat.mtrl-sci"],"license":"http://creativecommons.org/licenses/by/4.0/","primary_cat":"cs.SE","submitted_at":"2026-05-17T22:08:52Z","title_canon_sha256":"d141a1ce2230203c86e83d9a8f9955e422afc68f20c24bb60ba7de7202db9444"},"schema_version":"1.0","source":{"id":"2605.17675","kind":"arxiv","version":1}},"canonical_sha256":"cda1d2f2370cfd6006c1284d6291a9a23fc86d0397d2126f98a66e77ffff7baf","receipt":{"algorithm":"ed25519","builder_version":"pith-number-builder-2026-05-17-v1","canonical_sha256":"cda1d2f2370cfd6006c1284d6291a9a23fc86d0397d2126f98a66e77ffff7baf","first_computed_at":"2026-05-20T00:04:52.149030Z","key_id":"pith-v1-2026-05","kind":"pith_receipt","last_reissued_at":"2026-05-20T00:04:52.149030Z","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","receipt_version":"0.3","signature_b64":"KCYMNNXcRtKat/5Tph2ofzw4NVU4N+tGMxC3ZGFUGg4dl0moJM80NqFBScTqNnH4TdjUJVTcoSp75qwFmSfyAg==","signature_status":"signed_v1","signed_at":"2026-05-20T00:04:52.149966Z","signed_message":"canonical_sha256_bytes"},"source_id":"2605.17675","source_kind":"arxiv","source_version":1}}},"equivocations":[{"signer_id":"pith.science","event_type":"integrity_finding","target":"integrity","event_ids":["sha256:6feb74f05a4664daed8b50db1ea59324b8945b6ba849ba7d8e2d8ef63b3bf5e7","sha256:70158718da4a644e2c41a43f6515814c9dfcf3997cb35e757ee8a630c1e04b86","sha256:cb8966ac3a0022d9328c6497bb4a4beee80675efbd3802001d444d760cfbb412"]}],"invalid_events":[],"applied_event_ids":["sha256:8632e1d52d9e2743c1b01e92ac60289e769c1944e07c7b201145d6dda32f2633","sha256:7cbf5b007cbaa47a4319dffd61a2dc418dbb60ac0fdf9ec9084311eab17b7066"],"state_sha256":"aad0ecefa9c6ae8635577daa1163e4ed564df2666c7276db8c596436846822dc"},"bundle_signature":{"signature_status":"signed_v1","algorithm":"ed25519","key_id":"pith-v1-2026-05","public_key_fingerprint":"8d4b5ee74e4693bcd1df2446408b0d54","signature_b64":"Nfaqx7I7+08D72UjTbOeuunE1mrdkOne3U2rrWzBJO2YGjn4lkP0MvoTZJksR7wEwIBfzxgKtB3LFS375lM4Ag==","signed_message":"bundle_sha256_bytes","signed_at":"2026-05-22T04:05:09.910089Z","bundle_sha256":"10a0814dd01d2bd9626e5f6b7b78885b43cbc293603cc0c00eb527f259045e58"}}