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Yuko Okamoto (Nagoya University)

Identifiers

  • name variant Yuko Okamoto (Nagoya University) 0.60 · backfill

Papers (16)

  1. Combination of genetic crossover and replica-exchange method for conformational search of protein systems q-bio.BM · 2015 · author #5
  2. A Conformational Search Method for Protein Systems Using Genetic Crossover and Metropolis Criterion q-bio.BM · 2015 · author #5
  3. Deterministic replica-exchange method without pseudo random numbers for simulations of complex systems cond-mat.stat-mech · 2014 · author #2
  4. Predictions of tertiary stuctures of $\alpha$-helical membrane proteins by replica-exchange method with consideration of helix deformations q-bio.BM · 2014 · author #3
  5. Optimizations of force-field parameters for protein systems with the secondary-structure stability and instability physics.bio-ph · 2013 · author #2
  6. Amino-acid-dependent main-chain torsion-energy terms for protein systems cond-mat.stat-mech · 2012 · author #2
  7. Free energy calculations of a proton transfer reaction by simulated tempering umbrella sampling first principles molecular dynamics simulations cond-mat.stat-mech · 2012 · author #2
  8. Simulated Tempering and Magnetizing: An Application of Two-Dimensional Simulated Tempering to Two-Dimensional Ising Model and Its Crossover cond-mat.stat-mech · 2012 · author #2
  9. Enhanced Sampling Algorithms cond-mat.stat-mech · 2010 · author #3
  10. Generalized-Ensemble Algorithms for the Isobaric-Isothermal Ensemble cond-mat.stat-mech · 2010 · author #2
  11. Replica-Exchange Molecular Dynamics Simulations for Various Constant Temperature Algorithms cond-mat.stat-mech · 2010 · author #2
  12. Replica-Exchange Method in van der Waals Radius Space: Overcoming Steric Restrictions for Biomolecules cond-mat.stat-mech · 2009 · author #3
  13. Multicanonical Algorithm, Simulated Tempering, Replica-Exchange Method, and All That cond-mat.stat-mech · 2008 · author #2
  14. Generalized-Ensemble Algorithms for Protein Folding Simulations cond-mat.stat-mech · 2007 · author #3
  15. Explicit Symplectic Integrators of Molecular Dynamics Algorithms for Rigid-Body Molecules in the Canonical, Isothermal-Isobaric, and Related Ensembles cond-mat.stat-mech · 2006 · author #3
  16. Effective Sampling in the Configurational Space by the Multicanonical-Multioverlap Algorithm cond-mat.stat-mech · 2006 · author #2

Mentions

  • 1206.3909 #2 · backfill · confidence 0.70 Yuko Okamoto (Nagoya University)
  • 1206.0348 #2 · backfill · confidence 0.70 Yuko Okamoto (Nagoya University)
  • 1205.2523 #2 · backfill · confidence 0.70 Yuko Okamoto (Nagoya University)
  • 1012.5726 #3 · backfill · confidence 0.70 Yuko Okamoto (Nagoya University)
  • 1004.2076 #2 · backfill · confidence 0.70 Yuko Okamoto (Nagoya University)
  • 1004.2057 #2 · backfill · confidence 0.70 Yuko Okamoto (Nagoya University)
  • 0911.1011 #3 · backfill · confidence 0.70 Yuko Okamoto (Nagoya University)
  • 0810.1117 #2 · backfill · confidence 0.70 Yuko Okamoto (Nagoya University)
  • 0707.3382 #3 · backfill · confidence 0.70 Yuko Okamoto (Nagoya University)

Frequent Coauthors