John D. Chodera

Identifiers

• name variant John D. Chodera 0.60 · backfill

Papers (11)

1. Towards Automated Benchmarking of Atomistic Forcefields: Neat Liquid Densities and Static Dielectric Constants from the ThermoML Data Archive physics.chem-ph · 2015 · author #6
2. Time step rescaling recovers continuous-time dynamical properties for discrete-time Langevin integration of nonequilibrium systems physics.comp-ph · 2013 · author #2
3. Spectral rate theory for projected two-state kinetics physics.data-an · 2012 · author #2
4. A robust approach to estimating rates from time-correlation functions cond-mat.stat-mech · 2011 · author #1
5. Bayesian hidden Markov model analysis of single-molecule force spectroscopy: Characterizing kinetics under measurement uncertainty cond-mat.stat-mech · 2011 · author #1
6. Using nonequilibrium fluctuation theorems to understand and correct errors in equilibrium and nonequilibrium discrete Langevin dynamics simulations cond-mat.stat-mech · 2011 · author #2
7. Replica exchange and expanded ensemble simulations as Gibbs sampling: Simple improvements for enhanced mixing cond-mat.stat-mech · 2011 · author #1
8. Nonequilibrium candidate Monte Carlo: A new tool for efficient equilibrium simulation cond-mat.stat-mech · 2011 · author #4
9. Splitting probabilities as a test of reaction coordinate choice in single-molecule experiments cond-mat.stat-mech · 2011 · author #1
10. Estimating equilibrium ensemble averages using multiple time slices from driven nonequilibrium processes: theory and application to free energies, moments, and thermodynamic length in single-molecule pulling experiments cond-mat.stat-mech · 2010 · author #2
11. Optimal estimators and asymptotic variances for nonequilibrium path-ensemble averages cond-mat.stat-mech · 2009 · author #2

Mentions

• 1010.5467 #2 · backfill · confidence 0.70 John D. Chodera
• 0907.4776 #2 · backfill · confidence 0.70 John D. Chodera

Frequent Coauthors

• David D. L. Minh 3 shared papers
• Gavin E. Crooks 3 shared papers
• Carlos Bustamante 2 shared papers
• David A. Sivak 2 shared papers
• Frank No\'e 2 shared papers
• Jan-Hendrik Prinz 2 shared papers
• Susan Marqusee 2 shared papers
• Vijay S. Pande 2 shared papers
• Aaron Ewall-Wice 1 shared papers
• Ari\"en S. Rustenburg 1 shared papers
• Bettina Keller 1 shared papers
• Christian M. Kaiser 1 shared papers
• Christopher I. Bayly 1 shared papers
• Frank Noe 1 shared papers
• Jerome P. Nilmeier 1 shared papers
• Julie M. Behr 1 shared papers
• Kenneth Kroenlein 1 shared papers
• Kyle A. Beauchamp 1 shared papers
• Michael R. Shirts 1 shared papers
• Nina Singhal Hinrichs 1 shared papers