AHS-NPE is a scalable amortised hierarchical sequential neural posterior estimation method that fits multiple-network ERGMs to 586 resting-state fMRI networks and reproduces known aging-related connectivity differences.
Bergm: Bayesian exponential random graph models in R
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abstract
The Bergm package provides a comprehensive framework for Bayesian inference using Markov chain Monte Carlo (MCMC) algorithms. It can also supply graphical Bayesian goodness-of-fit procedures that address the issue of model adequacy. The package is simple to use and represents an attractive way of analysing network data as it offers the advantage of a complete probabilistic treatment of uncertainty. Bergm is based on the ergm package and therefore it makes use of the same model set-up and network simulation algorithms. The Bergm package has been continually improved in terms of speed performance over the last years and now offers the end-user a feasible option for carrying out Bayesian inference for networks with several thousands of nodes.
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A Scalable Exponential Random Graph Model: Amortised Hierarchical Sequential Neural Posterior Estimation with Applications in Neuroscience
AHS-NPE is a scalable amortised hierarchical sequential neural posterior estimation method that fits multiple-network ERGMs to 586 resting-state fMRI networks and reproduces known aging-related connectivity differences.