A pipeline from sequence alignments through a Potts model to an Ising foldon chain predicts protein folding curves, subdomains, and mutation effects, but without new experimental validation in this paper.
A Multiple Sequence Alignment (MSA) can be obtained from the 4 Pfam database [22] (now hosted by InterPro [23]) by searching for the protein family containing the target sequence
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Predicting protein folding dynamics using sequence information
A pipeline from sequence alignments through a Potts model to an Ising foldon chain predicts protein folding curves, subdomains, and mutation effects, but without new experimental validation in this paper.