An LLM entity-tagging pipeline plus multi-agent system extracts ~6.3M nuanced records from 22.5M PubMed papers across six tasks with lower measured error than existing curated databases.
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Bolek injects Morgan fingerprint embeddings into an instruction-tuned text model, then fine-tunes on molecular alignment and synthetic chain-of-thought tasks to improve performance and grounding on 15 TDC binary classification endpoints while generalizing to unseen tasks.
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Self-Driving Datasets: From 20 Million Papers to Nuanced Biomedical Knowledge at Scale
An LLM entity-tagging pipeline plus multi-agent system extracts ~6.3M nuanced records from 22.5M PubMed papers across six tasks with lower measured error than existing curated databases.
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Bolek: A Multimodal Language Model for Molecular Reasoning
Bolek injects Morgan fingerprint embeddings into an instruction-tuned text model, then fine-tunes on molecular alignment and synthetic chain-of-thought tasks to improve performance and grounding on 15 TDC binary classification endpoints while generalizing to unseen tasks.