A 1M-sequence ProtBERT in DeepChem scores below the original 216M-sequence ProtBERT on all four benchmarks, and a VAE-based enzyme generation pilot yields candidates with low structural similarity to known plastic-degrading enzymes.
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Open-Source Protein Language Models for Function Prediction and Protein Design
A 1M-sequence ProtBERT in DeepChem scores below the original 216M-sequence ProtBERT on all four benchmarks, and a VAE-based enzyme generation pilot yields candidates with low structural similarity to known plastic-degrading enzymes.