A PRISMA-based scoping review finds 26 studies (2021-2024) applying NLP and transformers to genomics, with k-mer tokenization and BERT-style models dominating.
Effect of tokenization on transformers for biological sequences
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Deciphering genomic codes using advanced NLP techniques: a scoping review
A PRISMA-based scoping review finds 26 studies (2021-2024) applying NLP and transformers to genomics, with k-mer tokenization and BERT-style models dominating.