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Bayesian nonparametric strategies for power maximization in rare variants association studies

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abstract

Rare variants are hypothesized to be largely responsible for heritability and susceptibility to disease in humans. So rare variants association studies hold promise for understanding disease. Conversely though, the rareness of the variants poses practical challenges; since these variants are present in few individuals, it can be difficult to develop data-collection and statistical methods that effectively leverage their sparse information. In this work, we develop a novel Bayesian nonparametric model to capture how design choices in rare variants association studies can impact their usefulness. We then show how to use our model to guide design choices under a fixed experimental budget in practice. In particular, we provide a practical workflow and illustrative experiments on simulated data.

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math.ST 1

years

2025 1

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CONDITIONAL 1

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Extended feature allocation models

math.ST · 2025-02-14 · conditional · novelty 7.0

A Bayesian point-process framework for feature allocations with dependent labels, with sufficientness postulates characterizing Poisson, mixed Poisson, and mixed binomial priors.

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  • Extended feature allocation models math.ST · 2025-02-14 · conditional · none · ref 1291 · internal anchor

    A Bayesian point-process framework for feature allocations with dependent labels, with sufficientness postulates characterizing Poisson, mixed Poisson, and mixed binomial priors.