muxvizpy is a sparse, Python-native reimplementation of the muxViz multilayer network analysis toolkit that scales to networks with tens of millions of edges and adds new analysis capabilities such as percolation and tensor decomposition.
infomeasure: A Comprehensive Python Package for Information Theory Measures and Estimators
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abstract
Information theory, i.e. the mathematical analysis of information and of its processing, has become a tenet of modern science; yet, its use in real-world studies is usually hindered by its computational complexity, the lack of coherent software frameworks, and, as a consequence, low reproducibility. We here introduce infomeasure, an open-source Python package designed to provide robust tools for calculating a wide variety of information-theoretic measures, including entropies, mutual information, transfer entropy and divergences. It is designed for both discrete and continuous variables; implements state-of-the-art estimation techniques; and allows the calculation of local measure values, $p$-values and $t$-scores. By unifying these approaches under one consistent framework, infomeasure aims to mitigate common pitfalls, ensure reproducibility, and simplify the practical implementation of information-theoretic analyses. In this contribution, we explore the motivation and features of infomeasure; its validation, using known analytical solutions; and exemplify its utility in a case study involving the analysis of human brain time series.
fields
q-bio.QM 1years
2026 1verdicts
CONDITIONAL 1representative citing papers
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muxvizpy: a Python library for the analysis of multilayer biological networks
muxvizpy is a sparse, Python-native reimplementation of the muxViz multilayer network analysis toolkit that scales to networks with tens of millions of edges and adds new analysis capabilities such as percolation and tensor decomposition.