Structured Gaussian process classifier embeds graph-encoded biological pathways into the kernel for uncertainty-aware omics classification and reports gains over unstructured baselines on three microbiome datasets.
The dynamics of the human infant gut microbiome in development and in progression toward type 1 diabetes.Cell host & microbe, 17(2):260–273, 2015
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Structured Gaussian Processes for Uncertainty-Aware Classification of High-Dimensional, Small-Sampled Omics Data
Structured Gaussian process classifier embeds graph-encoded biological pathways into the kernel for uncertainty-aware omics classification and reports gains over unstructured baselines on three microbiome datasets.