A hash-based read aligner with a read-supported intron-rebuilding step reports high sensitivity on simulated spliced RNA-seq reads, while being slower and less specific on genomic reads.
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ReadsMap: a new tool for high precision mapping of DNAseq and RNAseq read sequences
A hash-based read aligner with a read-supported intron-rebuilding step reports high sensitivity on simulated spliced RNA-seq reads, while being slower and less specific on genomic reads.