q2-classo and q2-gglasso are QIIME 2 plugins that implement sparse log-contrast regression/classification and graphical lasso-based network estimation for microbial compositional data.
Analysis of compositions of microbiomes with bias correction.Nature communications, 11(1):3514, 2020
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Sparse regression, classification, and microbial network estimation in QIIME2 with q2-classo and q2-gglasso
q2-classo and q2-gglasso are QIIME 2 plugins that implement sparse log-contrast regression/classification and graphical lasso-based network estimation for microbial compositional data.