Tropical axial attention learns pairwise distances from alignments and produces matrices closer to BME tree metrics than standard attention baselines by replacing dot-product attention with max-plus operators and adding ultrametric penalties.
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Phylogenetic Tree Inference with Tropical Axial Attention
Tropical axial attention learns pairwise distances from alignments and produces matrices closer to BME tree metrics than standard attention baselines by replacing dot-product attention with max-plus operators and adding ultrametric penalties.