EHRAG constructs structural hyperedges from sentence co-occurrence and semantic hyperedges from entity embedding clusters, then applies hybrid diffusion plus topic-aware PPR to retrieve top-k documents, outperforming baselines on four datasets with linear indexing cost and zero token overhead.
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Two new methods distill implicit regulatory knowledge from single-cell foundation models to enable generalizable gene regulatory network inference on unseen data.
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EHRAG: Bridging Semantic Gaps in Lightweight GraphRAG via Hybrid Hypergraph Construction and Retrieval
EHRAG constructs structural hyperedges from sentence co-occurrence and semantic hyperedges from entity embedding clusters, then applies hybrid diffusion plus topic-aware PPR to retrieve top-k documents, outperforming baselines on four datasets with linear indexing cost and zero token overhead.
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Towards Universal Gene Regulatory Network Inference: Unlocking Generalizable Regulatory Knowledge in Single-cell Foundation Models
Two new methods distill implicit regulatory knowledge from single-cell foundation models to enable generalizable gene regulatory network inference on unseen data.