STAR aligns multi-stain serial whole-slide pathology images through hierarchical rotation-translation correlation, with stain-conditioned preprocessing and quality control.
Automatic Nonrigid Histological Image Registration with Adaptive Multistep Algorithm
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abstract
In this paper, we present a short description of the method proposed to ANHIR challenge organized jointly with the IEEE ISBI 2019 conference. We propose a method consisting of preprocessing, initial alignment, nonrigid registration algorithms and a method to automatically choose the best result. The method turned out to be robust (99.792% robustness) and accurate (0.38% average median rTRE). The main drawback of the proposed method is relatively high computation time. However, this aspect can be easily improved by cleaning the code and proposing a GPU implementation.
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STAR: A Fast and Robust Rigid Registration Framework for Serial Histopathological Images
STAR aligns multi-stain serial whole-slide pathology images through hierarchical rotation-translation correlation, with stain-conditioned preprocessing and quality control.