MultistageOT models cell differentiation in a single-cell snapshot as a multi-step optimal transport process and predicts cell fates more accurately than the bimarginal StationaryOT method on mouse hematopoiesis lineage-tracing data.
Topics in optimal transportation (American Mathematical Society, 2003)
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MultistageOT: Multistage optimal transport infers trajectories from a snapshot of single-cell data
MultistageOT models cell differentiation in a single-cell snapshot as a multi-step optimal transport process and predicts cell fates more accurately than the bimarginal StationaryOT method on mouse hematopoiesis lineage-tracing data.