AbICL adapts antibody affinity ranking at test time by conditioning on labeled pairwise comparisons through a transformer context head trained with episodic meta-learning, achieving improved AUROC on the AbRank benchmark.
Deciphering antibody affinity maturation with language models and weakly supervised learning.Machine Learn- ing for Structural Biology Workshop, NeurIPS, 2021
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AbICL: In-Context Learning for Antigen-Specific Antibody Affinity Ranking
AbICL adapts antibody affinity ranking at test time by conditioning on labeled pairwise comparisons through a transformer context head trained with episodic meta-learning, achieving improved AUROC on the AbRank benchmark.