A full device-resident GPU LZ77 decoder for genomics reaches 260 GB/s throughput, 0.362 ms random read access, and range decoding for 50 GB files while remaining bit-perfect.
SAGe: Storage-Aware Genomic data compression,
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Compressed-Resident Genomics: Full-Pipeline Device-Resident GPU LZ77 Decode with Position-Invariant Random Access
A full device-resident GPU LZ77 decoder for genomics reaches 260 GB/s throughput, 0.362 ms random read access, and range decoding for 50 GB files while remaining bit-perfect.