FlashSpread delivers a fused GPU kernel for non-Markovian epidemic tau-leaping that reaches 8 Giga-NUPS on A100 for 10^6-node graphs (217x over CPU) with ~6-7% structural bias.
Eon (epidemics on networks): a fast, flexible python package for simulation, analytic approximation, and analysis of epidemics on networks.arXiv preprint arXiv:2001.02436
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FlashSpread: IO-Aware GPU Simulation of Non-Markovian Epidemic Dynamics via Kernel Fusion
FlashSpread delivers a fused GPU kernel for non-Markovian epidemic tau-leaping that reaches 8 Giga-NUPS on A100 for 10^6-node graphs (217x over CPU) with ~6-7% structural bias.