An efficient enumeration algorithm is developed from sufficient conditions on subgraphs in the bipartite König representation to identify autocatalytic subnetworks and minimal cores in full metabolic networks.
In: Varoquaux G, Vaught T, Millman J (eds) Proceedings of the 7th Python in Science Conference, Pasadena, CA USA, pp 11–15
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Enumeration of Autocatalytic Subsystems in Large Chemical Reaction Networks
An efficient enumeration algorithm is developed from sufficient conditions on subgraphs in the bipartite König representation to identify autocatalytic subnetworks and minimal cores in full metabolic networks.