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q-bio.GN 1

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2026 1

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Fast Iteration of Spaced k-mers

q-bio.GN · 2026-03-26 · accept · novelty 7.0 · 2 refs

Bit-manipulation algorithms extract spaced k-mers at up to 750 MB/s per core, up to an order of magnitude faster than prior methods.

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  • Fast Iteration of Spaced k-mers q-bio.GN · 2026-03-26 · accept · none · ref 28 · 2 links

    Bit-manipulation algorithms extract spaced k-mers at up to 750 MB/s per core, up to an order of magnitude faster than prior methods.