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Compositional amortized inference for large-scale hierarchical Bayesian models

2 Pith papers cite this work. Polarity classification is still indexing.

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abstract

Amortized Bayesian inference (ABI) with neural networks has emerged as a powerful simulation-based approach for estimating complex mechanistic models. However, extending ABI to hierarchical models, a cornerstone of modern Bayesian analysis, has been a major hurdle due to the need to simulate and process massive datasets. Our study tackles these challenges by extending compositional score matching (CSM), a divide-and-conquer strategy for Bayesian updating using diffusion models. We develop a new error-damping estimator to address previous stability issues of CSM when aggregating large numbers of data points. We first verified the numerical stability with up to 100,000 data points on a controlled benchmark. We then evaluated our method on a hierarchical AR model, achieving competitive performance to direct ABI baselines on smaller problem sizes while using less than one full model simulation for larger problem sizes. Finally, we address a large-scale inverse problem in advanced microscopy with over 750,000 parameters, demonstrating its relevance to real scientific applications.

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2026 2

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representative citing papers

Tokenised Flow Matching for Hierarchical Simulation Based Inference

cs.LG · 2026-04-22 · unverdicted · novelty 6.0

TFMPE combines likelihood factorisation with tokenised flow matching to enable efficient hierarchical SBI from single-site simulations, producing well-calibrated posteriors at lower computational cost on a new benchmark and real models.

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