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Interpretable Machine Learning for TabPFN

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abstract

The recently developed Prior-Data Fitted Networks (PFNs) have shown very promising results for applications in low-data regimes. The TabPFN model, a special case of PFNs for tabular data, is able to achieve state-of-the-art performance on a variety of classification tasks while producing posterior predictive distributions in mere seconds by in-context learning without the need for learning parameters or hyperparameter tuning. This makes TabPFN a very attractive option for a wide range of domain applications. However, a major drawback of the method is its lack of interpretability. Therefore, we propose several adaptations of popular interpretability methods that we specifically design for TabPFN. By taking advantage of the unique properties of the model, our adaptations allow for more efficient computations than existing implementations. In particular, we show how in-context learning facilitates the estimation of Shapley values by avoiding approximate retraining and enables the use of Leave-One-Covariate-Out (LOCO) even when working with large-scale Transformers. In addition, we demonstrate how data valuation methods can be used to address scalability challenges of TabPFN. Our proposed methods are implemented in a package tabpfn_iml and made available at https://github.com/david-rundel/tabpfn_iml.

fields

cs.LG 1

years

2026 1

verdicts

CONDITIONAL 1

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  • Evaluating Machine Learning Models for Post-Wildfire Debris-Flow Prediction cs.LG · 2026-08-05 · conditional · none · ref 13 · internal anchor

    TabPFN and top tree-based models reach threat scores of about 0.62 to 0.64 for post-wildfire debris-flow prediction, with rainfall intensity and storm accumulation the most important features, and synthetic data augmentation helps most models.