eccDNAMamba is a bidirectional Mamba-2 model with circular sequence augmentation and span masking that classifies eccDNA better than existing genomic foundation models on two benchmarks.
Extrachromosomal circular dna: category, biogenesis, recognition, and functions
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eccDNAMamba: A Pre-Trained Model for Ultra-Long eccDNA Sequence Analysis
eccDNAMamba is a bidirectional Mamba-2 model with circular sequence augmentation and span masking that classifies eccDNA better than existing genomic foundation models on two benchmarks.