PepSpecBench is a unified benchmark that standardizes preprocessing, uses backbone-disjoint splits to prevent leakage, and adds multi-species plus perturbation tests for peptide MS/MS prediction models.
Canterbury, Jason Weston, William Stafford Noble, and Michael J
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PepSpecBench: A Unified Evaluation Benchmark for Peptide Tandem Mass Spectrometry Prediction
PepSpecBench is a unified benchmark that standardizes preprocessing, uses backbone-disjoint splits to prevent leakage, and adds multi-species plus perturbation tests for peptide MS/MS prediction models.