A method to approximately uniformly sample molecular graphs and estimate their total count using small-world network distances, applied to assess database representativeness.
Machine learning the computational cost of quantum chemistry
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abstract
Computational quantum mechanics based molecular and materials design campaigns consume increasingly more high-performance compute resources, making improved job scheduling efficiency desirable in order to reduce carbon footprint or wasteful spending. We introduce quantum machine learning (QML) models of the computational cost of common quantum chemistry tasks. For 2D non-linear toy systems, single point, geometry optimization, and transition state calculations the out of sample prediction error of QML models of wall times decays systematically with training set size. We present numerical evidence for a toy system containing two functions and three commonly used optimizer and for thousands of organic molecular systems including closed and open shell equilibrium structures, as well as transition states. Levels of electronic structure theory considered include B3LYP/def2-TZVP, MP2/6-311G(d), local CCSD(T)/VTZ-F12, CASSCF/VDZ-F12, and MRCISD+Q-F12/VDZ-F12. In comparison to conventional indiscriminate job treatment, QML based wall time predictions significantly improve job scheduling efficiency for all tasks after training on just thousands of molecules. Resulting reductions in CPU time overhead range from 10% to 90%.
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Representative Random Sampling of Chemical Space
A method to approximately uniformly sample molecular graphs and estimate their total count using small-world network distances, applied to assess database representativeness.