CT-OT Flow estimates continuous-time dynamics from discrete temporal snapshots by using partial optimal transport to align intervals and kernel smoothing to reconstruct distributions for ODE/SDE training.
Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics.BMC Genomics, 19(1):477, 2018
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CT-OT Flow: Estimating Continuous-Time Dynamics from Discrete Temporal Snapshots
CT-OT Flow estimates continuous-time dynamics from discrete temporal snapshots by using partial optimal transport to align intervals and kernel smoothing to reconstruct distributions for ODE/SDE training.