A vector generalization of the PBD DNA melting model, derived from an intra base-pair toy model, yields improved estimates of melting entropy, unzipping force, hairpin opening rates, and open/closed base-pair equilibrium constants.
Mod- eling DNA beacons at the mesoscopic scale
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DNA melting: intra base-pair dynamics and a vector generalization of the Peyrard-Bishop-Dauxois model
A vector generalization of the PBD DNA melting model, derived from an intra base-pair toy model, yields improved estimates of melting entropy, unzipping force, hairpin opening rates, and open/closed base-pair equilibrium constants.