PAR is a multi-scale autoregressive transformer framework for protein backbone generation that uses coarse-to-fine prediction, noisy context learning, and flow-based decoding to achieve high-quality unconditional and zero-shot conditional outputs.
Why exposure bias matters: An imitation learning perspective of error accumulation in language generation
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Flow Marching jointly samples noise and physical time to learn a velocity field for generative PDE modeling, paired with a latent autoencoder and efficient transformer for large-scale pretraining on 2.5M trajectories.
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Protein Autoregressive Modeling via Multiscale Structure Generation
PAR is a multi-scale autoregressive transformer framework for protein backbone generation that uses coarse-to-fine prediction, noisy context learning, and flow-based decoding to achieve high-quality unconditional and zero-shot conditional outputs.
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Flow marching for a generative PDE foundation model
Flow Marching jointly samples noise and physical time to learn a velocity field for generative PDE modeling, paired with a latent autoencoder and efficient transformer for large-scale pretraining on 2.5M trajectories.