Small domain-specific language models identify fine-grained immunotherapy hallmarks in breast cancer abstracts more accurately than large language models do, while large models handle coarser categories better.
Aligned at the Start: Conceptual Groupings in LLM Embeddings
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abstract
This paper shifts focus to the often-overlooked input embeddings - the initial representations fed into transformer blocks. Using fuzzy graph, k-nearest neighbor (k-NN), and community detection, we analyze embeddings from diverse LLMs, finding significant categorical community structure aligned with predefined concepts and categories aligned with humans. We observe these groupings exhibit within-cluster organization (such as hierarchies, topological ordering, etc.), hypothesizing a fundamental structure that precedes contextual processing. To further investigate the conceptual nature of these groupings, we explore cross-model alignments across different LLM categories within their input embeddings, observing a medium to high degree of alignment. Furthermore, provide evidence that manipulating these groupings can play a functional role in mitigating ethnicity bias in LLM tasks.
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2025 1verdicts
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ImmunoFOMO: Are Language Models missing what oncologists see?
Small domain-specific language models identify fine-grained immunotherapy hallmarks in breast cancer abstracts more accurately than large language models do, while large models handle coarser categories better.