cuSBF delivers a GPU-accelerated Super Bloom Filter for genomic sequences with up to 9.1x insertion and 7.7x query speedups over GPU baselines and high SM utilization via sequence-aware tiling.
and Mount, Stephen M
2 Pith papers cite this work. Polarity classification is still indexing.
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2026 2verdicts
UNVERDICTED 2representative citing papers
The anti-lexicographic SUS-anchor achieves sampling densities less than 1% above the lower bound for alphabet size 4 and k=1, substantially outperforming bidirectional anchors.
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cuSBF: A Minimizer-Aware Bloom Filter for Genomic Sequence Data on Modern GPUs
cuSBF delivers a GPU-accelerated Super Bloom Filter for genomic sequences with up to 9.1x insertion and 7.7x query speedups over GPU baselines and high SM utilization via sequence-aware tiling.
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The anti-lexicographic SUS-anchor: a near-optimal k=1 sampling scheme
The anti-lexicographic SUS-anchor achieves sampling densities less than 1% above the lower bound for alphabet size 4 and k=1, substantially outperforming bidirectional anchors.