PLASMA applies regularized optimal transport with Sinkhorn iterations to produce fast, interpretable residue-level alignments and similarity scores between protein structures.
Jamasb, Alex Morehead, Chaitanya K
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Fast and Interpretable Protein Substructure Alignment via Optimal Transport
PLASMA applies regularized optimal transport with Sinkhorn iterations to produce fast, interpretable residue-level alignments and similarity scores between protein structures.