pith. sign in

arxiv: 0712.2398 · v1 · submitted 2007-12-14 · 🧬 q-bio.BM

Structural motifs of biomolecules

classification 🧬 q-bio.BM
keywords phasebiomoleculesbuildingcompactmarginallymoleculestubeunderstanding
0
0 comments X
read the original abstract

Biomolecular structures are assemblies of emergent anisotropic building modules such as uniaxial helices or biaxial strands. We provide an approach to understanding a marginally compact phase of matter that is occupied by proteins and DNA. This phase, which is in some respects analogous to the liquid crystal phase for chain molecules, stabilizes a range of shapes that can be obtained by sequence-independent interactions occurring intra- and intermolecularly between polymeric molecules. We present a singularityfree self-interaction for a tube in the continuum limit and show that this results in the tube being positioned in the marginally compact phase. Our work provides a unified framework for understanding the building blocks of biomolecules.

This paper has not been read by Pith yet.

discussion (0)

Sign in with ORCID, Apple, or X to comment. Anyone can read and Pith papers without signing in.