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arxiv: 1305.0916 · v1 · pith:5AB5ZH4Qnew · submitted 2013-05-04 · 🧬 q-bio.QM · q-bio.GN

Isoform reconstruction using short RNA-Seq reads by maximum likelihood is NP-hard

classification 🧬 q-bio.QM q-bio.GN
keywords isoformlikelihoodmaximumreconstructionnp-hardreadsrna-seqshort
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Maximum likelihood is a popular technique for isoform reconstruction. Here, we show that isoform reconstruction using short RNA-Seq reads by maximum likelihood is NP-hard.

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