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arxiv: 1308.2107 · v1 · pith:J6SPOX26new · submitted 2013-08-09 · 🧬 q-bio.OT

Genetic information, physical interpreters and thermodynamics; the material-informatic basis of biosemiosis

classification 🧬 q-bio.OT
keywords codescriptinformationconstructiongeneticmachineoriginbiochemicalbiosemiosis
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The sequence of nucleotide bases occurring in an organism's DNA is often regarded as a codescript for its construction. However, information in a DNA sequence can only be regarded as a codescript relative to an operational biochemical machine, which the information constrains in such a way as to direct the process of construction. In reality, any biochemical machine for which a DNA codescript is efficacious is itself produced through the mechanical interpretation of an identical or very similar codescript. In these terms the origin of life can be described as a bootstrap process involving the simultaneous accumulation of genetic information and the generation of a machine that interprets it as instructions for its own construction. This problem is discussed within the theoretical frameworks of thermodynamics, informatics and self-reproducing automata, paying special attention to the physico-chemical origin of genetic coding and the conditions, both thermodynamic and informatic, which a system must fulfil in order for it to sustain semiosis. The origin of life is equated with biosemiosis

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