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arxiv: 1812.03308 · v1 · pith:F2NT666Cnew · submitted 2018-12-08 · 💻 cs.SY

From Electric Circuits to Chemical Networks

classification 💻 cs.SY
keywords electricchemicalcomponentsfunctionalitynetworknetworksbiochemicalcircuit
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Electric circuits manipulate electric charge and magnetic flux via a small set of discrete components to implement useful functionality over continuous time-varying signals represented by currents and voltages. Much of the same functionality is useful to biological organisms, where it is implemented by a completely different set of discrete components (typically proteins) and signal representations (typically via concentrations). We describe how to take a linear electric circuit and systematically convert it to a chemical reaction network of the same functionality, as a dynamical system. Both the structure and the components of the electric circuit are dissolved in the process, but the resulting chemical network is intelligible. This approach provides access to a large library of well-studied devices, from analog electronics, whose chemical network realization can be compared to natural biochemical networks, or used to engineer synthetic biochemical networks.

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