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COVID-19 in South Asia: Real-time monitoring of reproduction and case fatality rate

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arxiv 2008.04347 v1 pith:SB4DDXAA submitted 2020-08-10 q-bio.PE

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keywords covid-19fatalitycaserateestimatedmonitoringasiadata
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abstract

As the ravages caused by COVID-19 pandemic are becoming inevitable with every moment, monitoring and understanding of transmission and fatality rate has become even more paramount for containing its spread. The key purpose of this analysis is to report the real-time effective reproduction rate ($R_t$ ) and case fatality rates (CFR) of COVID-19 in South Asia region. Data for this study are extracted from JHU CSSE COVID-19 Data source up to July 31, 2020. $R_t$ is estimated using exponential growth and time-dependent methods. R0 package in R-language is employed to estimate $R_t$ by fitting the existing epidemic curve. Case fatality rate is estimated by using Naive and Kaplan-Meier methods. Owing to exponential increase in cases of COVID-19, the pandemic will ensue in India, Maldives and in Nepal as $R_t$ was estimated greater than 1 for these countries. Although case fatality rates are found lesser as compared to other highly affected regions in the world, strict monitoring of deaths for better health facilities and care of patients is emphasized. More regional level cooperation and efforts are the need of time to minimize the detrimental effects of the virus.

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